RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 MAP3K20Q9NYL2 800 aaKnown RBP9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 CYP39A1Q9NYL5 469 aa9.38□□□□□ -0.91
TM4SF1-204ENST00000493348 RPTORQ8N122 1335 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 NFIBO00712 420 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 COBLO75128 1261 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 CCL5P13501 91 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 RBM25P49756 843 aaKnown RBP9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 CAP1Q01518 475 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 PDE4DQ08499 809 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 BAATQ14032 418 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 COL9A3Q14050 684 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 CCL14Q16627 93 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 ARHGEF16Q5VV41 709 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 CCDC148Q8NFR7 591 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 DNERQ8NFT8 737 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 NPLOC4Q8TAT6 608 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 TRIB2Q92519 343 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 USP6NLQ92738 828 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 ARMC5Q96C12 935 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 MTMR8Q96EF0 704 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 ZNF333Q96JL9 665 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 ZSCAN31Q96LW9 406 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 TINF2Q9BSI4 451 aa9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
TM4SF1-204ENST00000493348 KIAA0100Q14667 2235 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 CNTNAP5Q8WYK1 1306 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 SYNGAP1Q96PV0 1343 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 LOC102724159A0A0B4J2E5 919 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 hCG_1642624A0A1W2PR95 340 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 CYTH3O43739 400 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 MSCO60682 206 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 TFRCP02786 760 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 CAPN2P17655 700 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 CDC27P30260 824 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 CYP2C19P33261 490 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 MCM2P49736 904 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 EVCP57679 992 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 RPS6P62753 249 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 PWP2Q15269 919 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 ZNF792Q3KQV3 632 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 PPP1R18Q6NYC8 613 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 ZNF467Q7Z7K2 595 aaPredicted RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 NSUN6Q8TEA1 469 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 WASF1Q92558 559 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 TBC1D32Q96NH3 1257 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 RNF26Q9BY78 433 aaPredicted RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 PSTPIP2Q9H939 334 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 NCOA5Q9HCD5 579 aaKnown RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 NRBP1Q9UHY1 535 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 ZHX1Q9UKY1 873 aaPredicted RBP9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 LIMCH1Q9UPQ0 1083 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 NID2Q14112 1375 aa9.36□□□□□ -0.91
TM4SF1-204ENST00000493348 SPDYE3A6NKU9 549 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 PRPF3O43395 683 aaKnown RBP9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 PFKFB2O60825 505 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 DEXIO95424 95 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 SCG2P13521 617 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 IFNAR1P17181 557 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 TAL1P17542 331 aaPredicted RBP9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 GNA11P29992 359 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 ADCY7P51828 1080 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 CNTN2Q02246 1040 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 CACNB2Q08289 660 aaPredicted RBP9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 TRIM29Q14134 588 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 SLC30A10Q6XR72 485 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 ARMCX2Q7L311 632 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 FCHSD1Q86WN1 690 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 BICD2Q8TD16 824 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 CLEC4DQ8WXI8 215 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 PHKBQ93100 1093 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 IL17RAQ96F46 866 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 RMDN3Q96TC7 470 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 UNC93B1Q9H1C4 597 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 ABHD16BQ9H3Z7 469 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 C6orf50Q9HD87 102 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 SH2B1Q9NRF2 756 aaPredicted RBP9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 FAM184BQ9ULE4 1060 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 KIF3AQ9Y496 699 aa9.35□□□□□ -0.91
TM4SF1-204ENST00000493348 DNAJC25-GNG10A0A024R161 153 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 SMCO2A6NFE2 343 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 RARBP10826 455 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 MYCLP12524 364 aaPredicted RBP9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 AKR1A1P14550 325 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 CCND2P30279 289 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 HOXA13P31271 388 aaPredicted RBP9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 ALDH5A1P51649 535 aaPredicted RBP9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 SOX10P56693 466 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 NLRP5P59047 1200 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 MKRN4PQ13434 485 aaPredicted RBP9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 MTFR1Q15390 333 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 STXBP2Q15833 593 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 PFKFB3Q16875 520 aaPredicted RBP9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 MCTP2Q6DN12 878 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 FAM133AQ8N9E0 248 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms