RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 BOLA2Q9H3K6 86 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 VTA1Q9NP79 307 aa14.39□□□□□ -0.11
GPNMB-214ENST00000492858 GPHNQ9NQX3 736 aaPredicted RBP14.39□□□□□ -0.11
GPNMB-214ENST00000492858 TMEM232C9JQI7 657 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 BMP3P12645 472 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 CPT1AP50416 773 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 STAT2P52630 851 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 WDR5P61964 334 aaKnown RBP14.38□□□□□ -0.11
GPNMB-214ENST00000492858 IKQ13123 557 aaPredicted RBP14.38□□□□□ -0.11
GPNMB-214ENST00000492858 NBPF20Q3BBV1 942 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 TKFCQ3LXA3 575 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 SLFN13Q68D06 897 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 PTCRAQ6ISU1 281 aaPredicted RBP14.38□□□□□ -0.11
GPNMB-214ENST00000492858 RPAP2Q8IXW5 612 aaPredicted RBP14.38□□□□□ -0.11
GPNMB-214ENST00000492858 GMCL1P1Q8NEA9 526 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 MKL1Q969V6 931 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 KCNH6Q9H252 994 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 SUGCTQ9HAC7 445 aa14.38□□□□□ -0.11
GPNMB-214ENST00000492858 CFAP54Q96N23 3096 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 MINDY4BA8MYZ0 360 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 DCXO43602 365 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 BFSP2Q13515 415 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 UBE3CQ15386 1083 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 SBK1Q52WX2 424 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 OR6J1Q8NGC5 347 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 CHMP4CQ96CF2 233 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 PURBQ96QR8 312 aaKnown RBP14.37□□□□□ -0.11
GPNMB-214ENST00000492858 TGS1Q96RS0 853 aaKnown RBP14.37□□□□□ -0.11
GPNMB-214ENST00000492858 WDR11Q9BZH6 1224 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
GPNMB-214ENST00000492858 MTMR4Q9NYA4 1195 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 CYP39A1Q9NYL5 469 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 NOD1Q9Y239 953 aa14.37□□□□□ -0.11
GPNMB-214ENST00000492858 GRXCR2A6NFK2 248 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 PRDM1O75626 825 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 TTLL1O95922 423 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 RLBP1P12271 317 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 ERVK-21P61565 698 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 DEFB103AP81534 67 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 MUM1L1Q5H9M0 696 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 NFRKBQ6P4R8 1299 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 NSMFQ6X4W1 530 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 ZNF444Q8N0Y2 327 aaPredicted RBP14.36□□□□□ -0.11
GPNMB-214ENST00000492858 MORC4Q8TE76 937 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 CHURC1Q8WUH1 139 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 KIF1BPQ96EK5 621 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 C5orf42Q9H799 3197 aa14.36□□□□□ -0.11
GPNMB-214ENST00000492858 ATP5JP18859 108 aa14.35□□□□□ -0.11
GPNMB-214ENST00000492858 SNAP25P60880 206 aa14.35□□□□□ -0.11
GPNMB-214ENST00000492858 LRRFIP1Q32MZ4 808 aaKnown RBP14.35□□□□□ -0.11
GPNMB-214ENST00000492858 FAM160B2Q86V87 743 aa14.35□□□□□ -0.11
GPNMB-214ENST00000492858 RAD9AQ99638 391 aa14.35□□□□□ -0.11
GPNMB-214ENST00000492858 HAUS7Q99871 368 aa14.35□□□□□ -0.11
GPNMB-214ENST00000492858 TANC1Q9C0D5 1861 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 POTEB3A0JP26 581 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 H3BQ06 376 aaPredicted RBP14.34□□□□□ -0.11
GPNMB-214ENST00000492858 GJB5O95377 273 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 CHMP4BP1P59074 171 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 PTPN11Q06124 597 aaPredicted RBP14.34□□□□□ -0.11
GPNMB-214ENST00000492858 PUS10Q3MIT2 529 aaKnown RBP14.34□□□□□ -0.11
GPNMB-214ENST00000492858 BRDTQ58F21 947 aaPredicted RBP14.34□□□□□ -0.11
GPNMB-214ENST00000492858 POTEBQ6S5H4 581 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 TET1Q8NFU7 2136 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 STAG1Q8WVM7 1258 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 STRBPQ96SI9 672 aaKnown RBP14.34□□□□□ -0.11
GPNMB-214ENST00000492858 CRBNQ96SW2 442 aa14.34□□□□□ -0.11
GPNMB-214ENST00000492858 SLC1A4P43007 532 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 GPNMBQ14956 572 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 FAM117BQ6P1L5 589 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 GIMAP6Q6P9H5 292 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 HFE2Q6ZVN8 426 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 CCDC155Q8N6L0 562 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 CAGE1Q8TC20 777 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 AFAP1L1Q8TED9 768 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 ANKS1AQ92625 1134 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 GMCL1Q96IK5 515 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 ZNF287Q9HBT7 754 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 ADD3Q9UEY8 706 aaKnown RBP14.33□□□□□ -0.12
GPNMB-214ENST00000492858 CCPG1Q9ULG6 757 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 RAD50Q92878 1312 aa14.33□□□□□ -0.12
GPNMB-214ENST00000492858 RBM47A0AV96 593 aaKnown RBP14.32□□□□□ -0.12
GPNMB-214ENST00000492858 KPNA6O60684 536 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 MCCP23508 829 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 ALDH5A1P51649 535 aaPredicted RBP14.32□□□□□ -0.12
GPNMB-214ENST00000492858 BAATQ14032 418 aaPredicted RBP14.32□□□□□ -0.12
GPNMB-214ENST00000492858 PPP2R5BQ15173 497 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 PTGISQ16647 500 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 CNKSR3Q6P9H4 555 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 KCTD1Q719H9 257 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 LRRC8DQ7L1W4 858 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 NEK9Q8TD19 979 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 PTPRSQ13332 1948 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 SCN10AQ9Y5Y9 1956 aa14.32□□□□□ -0.12
GPNMB-214ENST00000492858 A6NJR5 290 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 PLA2G6O60733 806 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms