RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SLC43A3Q8NBI5 491 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 ZKSCAN3Q9BRR0 538 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 UBAC1Q9BSL1 405 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 WDR11Q9BZH6 1224 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 POLR3EQ9NVU0 708 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 ZSWIM5Q9P217 1185 aa14.58□□□□□ -0.08
COL6A1-205ENST00000492851 SUPT16HQ9Y5B9 1047 aaKnown RBP14.58□□□□□ -0.08
COL6A1-205ENST00000492851 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-205ENST00000492851 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-205ENST00000492851 RBM47A0AV96 593 aaKnown RBP14.57□□□□□ -0.08
COL6A1-205ENST00000492851 KPNA6O60684 536 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 CALML3P27482 149 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 RPS6P62753 249 aaKnown RBP14.57□□□□□ -0.08
COL6A1-205ENST00000492851 BEX3Q00994 111 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 PDE4DQ08499 809 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 TRDNQ13061 729 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 ITGA7Q13683 1181 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 RASGRP2Q7LDG7 609 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 FBXO16Q8IX29 292 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-205ENST00000492851 CLEC4DQ8WXI8 215 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 GPHNQ9NQX3 736 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-205ENST00000492851 PDGFCQ9NRA1 345 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 ASTN1O14525 1302 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 ABCB11O95342 1321 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 NEDD4P46934 1319 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 RAD50Q92878 1312 aa14.57□□□□□ -0.08
COL6A1-205ENST00000492851 B4E1Z4 1266 aa14.56□□□□□ -0.08
COL6A1-205ENST00000492851 CD4P01730 458 aa14.56□□□□□ -0.08
COL6A1-205ENST00000492851 PARP1P09874 1014 aaKnown RBP14.56□□□□□ -0.08
COL6A1-205ENST00000492851 SUPT20HL2P0C7V6 817 aa14.56□□□□□ -0.08
COL6A1-205ENST00000492851 TRAF1Q13077 416 aa14.56□□□□□ -0.08
COL6A1-205ENST00000492851 PSRC1Q6PGN9 363 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-205ENST00000492851 SCFD2Q8WU76 684 aa14.56□□□□□ -0.08
COL6A1-205ENST00000492851 MTIF3Q9H2K0 278 aaKnown RBP14.56□□□□□ -0.08
COL6A1-205ENST00000492851 SEMA6BQ9H3T3 888 aa14.56□□□□□ -0.08
COL6A1-205ENST00000492851 LTBP2Q14767 1821 aa14.56□□□□□ -0.08
COL6A1-205ENST00000492851 GOLGA8HP0CJ92 632 aa14.55□□□□□ -0.08
COL6A1-205ENST00000492851 IRX5P78411 483 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-205ENST00000492851 IFIT1BQ5T764 474 aaKnown RBP14.55□□□□□ -0.08
COL6A1-205ENST00000492851 ENAHQ8N8S7 591 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-205ENST00000492851 PURBQ96QR8 312 aaKnown RBP14.55□□□□□ -0.08
COL6A1-205ENST00000492851 UBA5Q9GZZ9 404 aa14.55□□□□□ -0.08
COL6A1-205ENST00000492851 MRPL11Q9Y3B7 192 aaKnown RBP14.55□□□□□ -0.08
COL6A1-205ENST00000492851 U3KPZ7 1027 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-205ENST00000492851 TNKSO95271 1327 aa14.55□□□□□ -0.08
COL6A1-205ENST00000492851 DHX16O60231 1041 aaKnown RBP14.54□□□□□ -0.08
COL6A1-205ENST00000492851 EDNRBP24530 442 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 EPHB4P54760 987 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 TTLL4Q14679 1199 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 PPP2R5BQ15173 497 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 CDC37Q16543 378 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-205ENST00000492851 USH1GQ495M9 461 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 TTC22Q5TAA0 569 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 SLC30A10Q6XR72 485 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 RPUSD2Q8IZ73 545 aaKnown RBP14.54□□□□□ -0.08
COL6A1-205ENST00000492851 ADGRF4Q8IZF3 695 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 SAMD3Q8N6K7 520 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 OR6J1Q8NGC5 347 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 NSUN6Q8TEA1 469 aaKnown RBP14.54□□□□□ -0.08
COL6A1-205ENST00000492851 IWS1Q96ST2 819 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 HIPK3Q9H422 1215 aa14.54□□□□□ -0.08
COL6A1-205ENST00000492851 MAP3K20Q9NYL2 800 aaKnown RBP14.54□□□□□ -0.08
COL6A1-205ENST00000492851 ERICH2A1L162 156 aa14.53□□□□□ -0.08
COL6A1-205ENST00000492851 CSF2RAP15509 400 aa14.53□□□□□ -0.08
COL6A1-205ENST00000492851 FBXO11Q86XK2 927 aa14.53□□□□□ -0.08
COL6A1-205ENST00000492851 FAM161BQ96MY7 647 aa14.53□□□□□ -0.08
COL6A1-205ENST00000492851 GUCD1Q96NT3 240 aa14.53□□□□□ -0.08
COL6A1-205ENST00000492851 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL6A1-205ENST00000492851 MTG1Q9BT17 334 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-205ENST00000492851 IL23AQ9NPF7 189 aa14.53□□□□□ -0.08
COL6A1-205ENST00000492851 A6NJR5 290 aa14.52□□□□□ -0.09
COL6A1-205ENST00000492851 DLL1O00548 723 aa14.52□□□□□ -0.09
COL6A1-205ENST00000492851 TXNP10599 105 aaKnown RBP14.52□□□□□ -0.09
COL6A1-205ENST00000492851 PTPN11Q06124 597 aaPredicted RBP14.52□□□□□ -0.09
COL6A1-205ENST00000492851 SART3Q15020 963 aaKnown RBP14.52□□□□□ -0.09
COL6A1-205ENST00000492851 STXBP2Q15833 593 aa14.52□□□□□ -0.09
COL6A1-205ENST00000492851 TMEM240Q5SV17 173 aa14.52□□□□□ -0.09
COL6A1-205ENST00000492851 CDX2Q99626 313 aaPredicted RBP14.52□□□□□ -0.09
COL6A1-205ENST00000492851 AMNQ9BXJ7 453 aa14.52□□□□□ -0.09
COL6A1-205ENST00000492851 PPP1R12CQ9BZL4 782 aa14.52□□□□□ -0.09
COL6A1-205ENST00000492851 GRIN2DO15399 1336 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 FGBP02675 491 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 MYL3P08590 195 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 PURAQ00577 322 aaKnown RBP14.51□□□□□ -0.09
COL6A1-205ENST00000492851 QRICH1Q2TAL8 776 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 RASIP1Q5U651 963 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 NFRKBQ6P4R8 1299 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 RALYLQ86SE5 291 aaKnown RBP14.51□□□□□ -0.09
COL6A1-205ENST00000492851 RMDN3Q96TC7 470 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 ALDH8A1Q9H2A2 487 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-205ENST00000492851 JMJD4Q9H9V9 463 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 VAT1LQ9HCJ6 419 aa14.51□□□□□ -0.09
COL6A1-205ENST00000492851 DDX49Q9Y6V7 483 aaKnown RBP14.51□□□□□ -0.09
COL6A1-205ENST00000492851 KLRF2D3W0D1 207 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 B4GALT4O60513 344 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 EIF3JO75822 258 aaKnown RBP14.5□□□□□ -0.09
COL6A1-205ENST00000492851 PFKMP08237 780 aa14.5□□□□□ -0.09
COL6A1-205ENST00000492851 GSPT1P15170 499 aaKnown RBP14.5□□□□□ -0.09
COL6A1-205ENST00000492851 CHMLP26374 656 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms