RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 FEM1BQ9UK73 627 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 RIPK3Q9Y572 518 aa11.64□□□□□ -0.55
TNFRSF9-203ENST00000492571 RAB11FIP3O75154 756 aa11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 SUPT20HL2P0C7V6 817 aa11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 ITGA7Q13683 1181 aa11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 ADGRE1Q14246 886 aa11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 RPAP2Q8IXW5 612 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 CCDC144CPQ8IYA2 1237 aa11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 COG6Q9Y2V7 657 aa11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 HCN4Q9Y3Q4 1203 aa11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 PCDHA11Q9Y5I1 949 aa11.63□□□□□ -0.55
TNFRSF9-203ENST00000492571 CDK5RAP2Q96SN8 1893 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 MINDY4BA8MYZ0 360 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 NDUFB10O96000 172 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 CD4P01730 458 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 PFKMP08237 780 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 ACTN1P12814 892 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 ATP2A2P16615 1042 aaKnown RBP11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 ATP5JP18859 108 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 CCL23P55773 120 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 BEX3Q00994 111 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 IKQ13123 557 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 FSCN1Q16658 493 aaKnown RBP11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 CXCL17Q6UXB2 119 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 ACAD9Q9H845 621 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 SLC38A10Q9HBR0 1119 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 HOMER2Q9NSB8 354 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 RAPGEFL1Q9UHV5 662 aa11.62□□□□□ -0.55
TNFRSF9-203ENST00000492571 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 DYNC1LI2O43237 492 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 APPP05067 770 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 TMEM67Q5HYA8 995 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 IQSEC1Q6DN90 963 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 TLK2Q86UE8 772 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 STK11IPQ8N1F8 1099 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 CHURC1Q8WUH1 139 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 HAUS7Q99871 368 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 CHMP4BQ9H444 224 aaKnown RBP11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 SYNPO2Q9UMS6 1093 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 COG5Q9UP83 839 aa11.61□□□□□ -0.55
TNFRSF9-203ENST00000492571 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 TTLL1O95922 423 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 SLC3A2P08195 630 aaKnown RBP11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 BMP3P12645 472 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 BMP1P13497 986 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 RABGGTBP53611 331 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 NKX3-2P78367 333 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 SBK1Q52WX2 424 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 BRDTQ58F21 947 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 GIMAP6Q6P9H5 292 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 MKL1Q969V6 931 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 TSR3Q9UJK0 312 aaKnown RBP11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 YBX2Q9Y2T7 364 aaKnown RBP11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 Q9Y3F1 56 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 A0A0G2JMZ2 1700 aa11.6□□□□□ -0.55
TNFRSF9-203ENST00000492571 SMCHD1A6NHR9 2005 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 ERC2O15083 957 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 RLBP1P12271 317 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 GNAT2P19087 354 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 RASA1P20936 1047 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 TDO2P48775 406 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 STAT2P52630 851 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 LRRFIP1Q32MZ4 808 aaKnown RBP11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 SLFNL1Q499Z3 407 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 NYAP1Q6ZVC0 841 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 FAM160B2Q86V87 743 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 SLC43A3Q8NBI5 491 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 RETREG2Q8NC44 543 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 NOC4LQ9BVI4 516 aaKnown RBP11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 TRPV6Q9H1D0 765 aa11.59□□□□□ -0.55
TNFRSF9-203ENST00000492571 TMEM232C9JQI7 657 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 SMIM22K7EJ46 135 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 ADCY6O43306 1168 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 B4GALT4O60513 344 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 TSPY3P0CV98 308 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 TSPY8P0CW00 308 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 SLC1A4P43007 532 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 CNTN2Q02246 1040 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 TFF2Q03403 129 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 PDE4BQ07343 736 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 SLFN13Q68D06 897 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 KIAA1211Q6ZU35 1233 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 FAM133AQ8N9E0 248 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 GMCL1P1Q8NEA9 526 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 NECAB3Q96P71 396 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 TRERF1Q96PN7 1200 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 STRBPQ96SI9 672 aaKnown RBP11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 NACAP1Q9BZK3 213 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 RNF146Q9NTX7 359 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 MTMR4Q9NYA4 1195 aa11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 GNEQ9Y223 722 aaKnown RBP11.58□□□□□ -0.56
TNFRSF9-203ENST00000492571 NAV1Q8NEY1 1877 aa11.57□□□□□ -0.56
TNFRSF9-203ENST00000492571 MYO5AQ9Y4I1 1855 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms