RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 DUSP28Q4G0W2 176 aa17.14■□□□□ 0.33
SSR4-212ENST00000491833 TSHZ3Q63HK5 1081 aa17.14■□□□□ 0.33
SSR4-212ENST00000491833 MORC4Q8TE76 937 aa17.14■□□□□ 0.33
SSR4-212ENST00000491833 SLC9A7Q96T83 725 aa17.14■□□□□ 0.33
SSR4-212ENST00000491833 TRMT13Q9NUP7 481 aaKnown RBP17.14■□□□□ 0.33
SSR4-212ENST00000491833 PRR12Q9ULL5 1215 aa17.14■□□□□ 0.33
SSR4-212ENST00000491833 TCF20Q9UGU0 1960 aaKnown RBP17.14■□□□□ 0.33
SSR4-212ENST00000491833 CHD7Q9P2D1 2997 aa17.14■□□□□ 0.33
SSR4-212ENST00000491833 CYP2C9P11712 490 aa17.13■□□□□ 0.33
SSR4-212ENST00000491833 CPT1AP50416 773 aa17.13■□□□□ 0.33
SSR4-212ENST00000491833 SNAP25P60880 206 aa17.13■□□□□ 0.33
SSR4-212ENST00000491833 TMEM63BQ5T3F8 832 aa17.13■□□□□ 0.33
SSR4-212ENST00000491833 DEFB128Q7Z7B8 93 aa17.13■□□□□ 0.33
SSR4-212ENST00000491833 VWCEQ96DN2 955 aa17.13■□□□□ 0.33
SSR4-212ENST00000491833 ADD3Q9UEY8 706 aaKnown RBP17.13■□□□□ 0.33
SSR4-212ENST00000491833 MTCH2Q9Y6C9 303 aa17.13■□□□□ 0.33
SSR4-212ENST00000491833 SCN5AQ14524 2016 aa17.13■□□□□ 0.33
SSR4-212ENST00000491833 XIRP2A4UGR9 3374 aa17.12■□□□□ 0.33
SSR4-212ENST00000491833 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
SSR4-212ENST00000491833 ICAM1P05362 532 aa17.12■□□□□ 0.33
SSR4-212ENST00000491833 MYL3P08590 195 aa17.12■□□□□ 0.33
SSR4-212ENST00000491833 POU3F3P20264 500 aaPredicted RBP17.12■□□□□ 0.33
SSR4-212ENST00000491833 RFC2P35250 354 aa17.12■□□□□ 0.33
SSR4-212ENST00000491833 ALDH5A1P51649 535 aaPredicted RBP17.12■□□□□ 0.33
SSR4-212ENST00000491833 PURAQ00577 322 aaKnown RBP17.12■□□□□ 0.33
SSR4-212ENST00000491833 RCSD1Q6JBY9 416 aa17.12■□□□□ 0.33
SSR4-212ENST00000491833 RASGRP2Q7LDG7 609 aa17.12■□□□□ 0.33
SSR4-212ENST00000491833 GPHNQ9NQX3 736 aaPredicted RBP17.12■□□□□ 0.33
SSR4-212ENST00000491833 RAD50Q92878 1312 aa17.12■□□□□ 0.33
SSR4-212ENST00000491833 NCOR1O75376 2440 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 COL4A4P53420 1690 aaPredicted RBP17.11■□□□□ 0.33
SSR4-212ENST00000491833 LOC102724159A0A0B4J2E5 919 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 RFXAPO00287 272 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 PWP2Q15269 919 aaKnown RBP17.11■□□□□ 0.33
SSR4-212ENST00000491833 CCDC96Q2M329 555 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 FAM47CQ5HY64 1035 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 OR6J1Q8NGC5 347 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 PURBQ96QR8 312 aaKnown RBP17.11■□□□□ 0.33
SSR4-212ENST00000491833 MTG1Q9BT17 334 aaPredicted RBP17.11■□□□□ 0.33
SSR4-212ENST00000491833 WDR11Q9BZH6 1224 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 COG5Q9UP83 839 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 MTMR7Q9Y216 660 aa17.11■□□□□ 0.33
SSR4-212ENST00000491833 SCN10AQ9Y5Y9 1956 aa17.1■□□□□ 0.33
SSR4-212ENST00000491833 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
SSR4-212ENST00000491833 BRDTQ58F21 947 aaPredicted RBP17.1■□□□□ 0.33
SSR4-212ENST00000491833 PHOSPHO2Q8TCD6 241 aa17.1■□□□□ 0.33
SSR4-212ENST00000491833 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
SSR4-212ENST00000491833 RANBP17Q9H2T7 1088 aaKnown RBP17.1■□□□□ 0.33
SSR4-212ENST00000491833 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
SSR4-212ENST00000491833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSR4-212ENST00000491833 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
SSR4-212ENST00000491833 KIF28PB7ZC32 967 aa17.09■□□□□ 0.33
SSR4-212ENST00000491833 BAATQ14032 418 aaPredicted RBP17.09■□□□□ 0.33
SSR4-212ENST00000491833 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
SSR4-212ENST00000491833 RETREG2Q8NC44 543 aa17.09■□□□□ 0.33
SSR4-212ENST00000491833 DCAF4Q8WV16 495 aa17.09■□□□□ 0.33
SSR4-212ENST00000491833 ARNTL2Q8WYA1 636 aa17.09■□□□□ 0.33
SSR4-212ENST00000491833 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
SSR4-212ENST00000491833 HCN4Q9Y3Q4 1203 aa17.09■□□□□ 0.33
SSR4-212ENST00000491833 TTC41PQ6P2S7 1318 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 RBM47A0AV96 593 aaKnown RBP17.08■□□□□ 0.32
SSR4-212ENST00000491833 EPOPA6NHQ4 379 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 NFIBO00712 420 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSR4-212ENST00000491833 NMT2O60551 498 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 TAP1Q03518 808 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 NBPF20Q3BBV1 942 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 NFRKBQ6P4R8 1299 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 HERC6Q8IVU3 1022 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 MPHOSPH6Q99547 160 aaKnown RBP17.08■□□□□ 0.32
SSR4-212ENST00000491833 FTOQ9C0B1 505 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSR4-212ENST00000491833 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 NOD1Q9Y239 953 aa17.08■□□□□ 0.32
SSR4-212ENST00000491833 PRRC2BQ5JSZ5 2229 aaKnown RBP17.08■□□□□ 0.32
SSR4-212ENST00000491833 BAIAP3O94812 1187 aa17.07■□□□□ 0.32
SSR4-212ENST00000491833 IQCF3P0C7M6 154 aa17.07■□□□□ 0.32
SSR4-212ENST00000491833 CTDSPL2Q05D32 466 aa17.07■□□□□ 0.32
SSR4-212ENST00000491833 PTPN11Q06124 597 aaPredicted RBP17.07■□□□□ 0.32
SSR4-212ENST00000491833 BFSP2Q13515 415 aa17.07■□□□□ 0.32
SSR4-212ENST00000491833 ZMYM1Q5SVZ6 1142 aa17.07■□□□□ 0.32
SSR4-212ENST00000491833 SYDE2Q5VT97 1194 aa17.07■□□□□ 0.32
SSR4-212ENST00000491833 KRT40Q6A162 431 aa17.07■□□□□ 0.32
SSR4-212ENST00000491833 SLC30A10Q6XR72 485 aa17.07■□□□□ 0.32
SSR4-212ENST00000491833 BDP1A6H8Y1 2624 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 REV3LO60673 3130 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 RANBP6O60518 1105 aaKnown RBP17.06■□□□□ 0.32
SSR4-212ENST00000491833 KPNA6O60684 536 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 ARHGEF15O94989 841 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 CALML3P27482 149 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 SLC16A2P36021 539 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 KCNJ6P48051 423 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 PDE4DQ08499 809 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 CCDC155Q8N6L0 562 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 SCFD2Q8WU76 684 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 HLA-CQ95604 372 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 DCTPP1Q9H773 170 aa17.06■□□□□ 0.32
SSR4-212ENST00000491833 TLL1O43897 1013 aa17.05■□□□□ 0.32
SSR4-212ENST00000491833 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
SSR4-212ENST00000491833 NOVP48745 357 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms