RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 NKX3-2P78367 333 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 BEX3Q00994 111 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 FAAP100Q0VG06 881 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 TRDNQ13061 729 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 PWP2Q15269 919 aaKnown RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 CDC37Q16543 378 aaPredicted RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 FSCN1Q16658 493 aaKnown RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 IFIT1BQ5T764 474 aaKnown RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 IQSEC1Q6DN90 963 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 TAPT1Q6NXT6 567 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 ADGRF4Q8IZF3 695 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 DEFB123Q8N688 67 aa9.66□□□□□ -0.86
LSM2-213ENST00000491421 MPHOSPH6Q99547 160 aaKnown RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 ZNFX1Q9P2E3 1918 aaKnown RBP9.66□□□□□ -0.86
LSM2-213ENST00000491421 ABCB11O95342 1321 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 ARVCFO00192 962 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 ZEB2O60315 1214 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 CABYRO75952 493 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 PTGS1P23219 599 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 PTH1RQ03431 593 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 PDE4DQ08499 809 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 SHHQ15465 462 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 C9orf50Q5SZB4 431 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 CXCL17Q6UXB2 119 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 Q7L0L9 218 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 CYB5R4Q7L1T6 521 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 Q9Y3F1 56 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 U3KPZ7 1027 aaPredicted RBP9.65□□□□□ -0.86
LSM2-213ENST00000491421 LAMA2P24043 3122 aaKnown RBP9.65□□□□□ -0.86
LSM2-213ENST00000491421 LAMA4Q16363 1823 aa9.65□□□□□ -0.86
LSM2-213ENST00000491421 B4DLN1 442 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 TLR3O15455 904 aaKnown RBP9.64□□□□□ -0.87
LSM2-213ENST00000491421 SGSM2O43147 1006 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 CYP21A2P08686 494 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 CDK7P50613 346 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 MRPL12P52815 198 aaKnown RBP9.64□□□□□ -0.87
LSM2-213ENST00000491421 FPGSQ05932 587 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 SEC23AQ15436 765 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 QRICH1Q2TAL8 776 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 DUSP28Q4G0W2 176 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 TMEM63BQ5T3F8 832 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 RALYLQ86SE5 291 aaKnown RBP9.64□□□□□ -0.87
LSM2-213ENST00000491421 FBXO11Q86XK2 927 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 DNERQ8NFT8 737 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 WDR11Q9BZH6 1224 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 JMJD4Q9H9V9 463 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 VAT1LQ9HCJ6 419 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 TBX21Q9UL17 535 aa9.64□□□□□ -0.87
LSM2-213ENST00000491421 RBM47A0AV96 593 aaKnown RBP9.63□□□□□ -0.87
LSM2-213ENST00000491421 ERICH2A1L162 156 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 KLRF2D3W0D1 207 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 IFIT3O14879 490 aaKnown RBP9.63□□□□□ -0.87
LSM2-213ENST00000491421 TIMP1P01033 207 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 EDNRBP24530 442 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 CPT1AP50416 773 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 EPHB4P54760 987 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 ITGA7Q13683 1181 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 SART3Q15020 963 aaKnown RBP9.63□□□□□ -0.87
LSM2-213ENST00000491421 PPP2R5BQ15173 497 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 MCF2L2Q86YR7 1114 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 FAM126BQ8IXS8 530 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 NCOA7Q8NI08 942 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 SCFD2Q8WU76 684 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 RNPC3Q96LT9 517 aaKnown RBP9.63□□□□□ -0.87
LSM2-213ENST00000491421 MAF1Q9H063 256 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 MRPL11Q9Y3B7 192 aaKnown RBP9.63□□□□□ -0.87
LSM2-213ENST00000491421 TAF6LQ9Y6J9 622 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 LTBP2Q14767 1821 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 SMCHD1A6NHR9 2005 aa9.63□□□□□ -0.87
LSM2-213ENST00000491421 LRRC37A2A6NM11 1700 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 E7EWF7 191 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 PSMC6P62333 389 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 BRDTQ58F21 947 aaPredicted RBP9.62□□□□□ -0.87
LSM2-213ENST00000491421 FAM109BQ6ICB4 259 aaPredicted RBP9.62□□□□□ -0.87
LSM2-213ENST00000491421 MFSD5Q6N075 450 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 STAG2Q8N3U4 1231 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 SLC43A3Q8NBI5 491 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 OR6J1Q8NGC5 347 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 SYTL5Q8TDW5 730 aaPredicted RBP9.62□□□□□ -0.87
LSM2-213ENST00000491421 NSUN6Q8TEA1 469 aaKnown RBP9.62□□□□□ -0.87
LSM2-213ENST00000491421 TBC1D5Q92609 795 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 MAP4K1Q92918 833 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 AMNQ9BXJ7 453 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 SEZ6LQ9BYH1 1024 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 PPP1R12CQ9BZL4 782 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 MTMR10Q9NXD2 777 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 MAD2L2Q9UI95 211 aa9.62□□□□□ -0.87
LSM2-213ENST00000491421 RBM8AQ9Y5S9 174 aaKnown RBP9.62□□□□□ -0.87
LSM2-213ENST00000491421 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
LSM2-213ENST00000491421 ZBTB5O15062 677 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 NKRFO15226 690 aaKnown RBP eCLIP9.61□□□□□ -0.87
LSM2-213ENST00000491421 CD4P01730 458 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 MYL3P08590 195 aa9.61□□□□□ -0.87
LSM2-213ENST00000491421 TXNP10599 105 aaKnown RBP9.61□□□□□ -0.87
LSM2-213ENST00000491421 SMAD3P84022 425 aaKnown RBP9.61□□□□□ -0.87
LSM2-213ENST00000491421 PPIGQ13427 754 aaKnown RBP eCLIP9.61□□□□□ -0.87
LSM2-213ENST00000491421 TTLL4Q14679 1199 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms