RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 CTDNEP1O95476 244 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 ADCY7P51828 1080 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 PKN1Q16512 942 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 MUM1L1Q5H9M0 696 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 OTOP1Q7RTM1 612 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 ZNF467Q7Z7K2 595 aaPredicted RBP22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 DNERQ8NFT8 737 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 RAET1EQ8TD07 263 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 EHMT1Q9H9B1 1298 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 BRMS1Q9HCU9 246 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 CYP39A1Q9NYL5 469 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 SMC3Q9UQE7 1217 aa22.82■■□□□ 1.24
SHROOM3-209ENST00000490690 hCG_1642624A0A1W2PR95 340 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 NFIBO00712 420 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 CFBP00751 764 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 PDIA4P13667 645 aaKnown RBP22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 GPKOWQ92917 476 aaPredicted RBP eCLIP22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 ALG1Q9BT22 464 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 ARHGAP39Q9C0H5 1083 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 ZMYND12Q9H0C1 365 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 RIC8AQ9NPQ8 531 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 GJD2Q9UKL4 321 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 PCNTO95613 3336 aa22.81■■□□□ 1.24
SHROOM3-209ENST00000490690 ZNF236Q9UL36 1845 aa22.8■■□□□ 1.24
SHROOM3-209ENST00000490690 SMCO2A6NFE2 343 aa22.8■■□□□ 1.24
SHROOM3-209ENST00000490690 FOSP01100 380 aaPredicted RBP22.8■■□□□ 1.24
SHROOM3-209ENST00000490690 FLT3LGP49771 235 aa22.8■■□□□ 1.24
SHROOM3-209ENST00000490690 HSD17B4P51659 736 aa22.8■■□□□ 1.24
SHROOM3-209ENST00000490690 RPS6P62753 249 aaKnown RBP22.8■■□□□ 1.24
SHROOM3-209ENST00000490690 PXYLP1Q8TE99 480 aa22.8■■□□□ 1.24
SHROOM3-209ENST00000490690 USP6NLQ92738 828 aa22.8■■□□□ 1.24
SHROOM3-209ENST00000490690 BAZ2BQ9UIF8 2168 aaKnown RBP22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 DNAJC25-GNG10A0A024R161 153 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 ASB14A6NK59 587 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 PDCP20941 246 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 CTGFP29279 349 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 NLRP5P59047 1200 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 PRKCZQ05513 592 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 ST3GAL1Q11201 340 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 AP3B2Q13367 1082 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 BAATQ14032 418 aaPredicted RBP22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 OLFML2BQ68BL8 750 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 SLAIN1Q8ND83 568 aa22.79■■□□□ 1.24
SHROOM3-209ENST00000490690 SPDYE3A6NKU9 549 aa22.78■■□□□ 1.24
SHROOM3-209ENST00000490690 ANP32AP39687 249 aaKnown RBP22.78■■□□□ 1.24
SHROOM3-209ENST00000490690 SAFBQ15424 915 aaKnown RBP eCLIP22.78■■□□□ 1.24
SHROOM3-209ENST00000490690 FAM133AQ8N9E0 248 aa22.78■■□□□ 1.24
SHROOM3-209ENST00000490690 PTPN22Q9Y2R2 807 aa22.78■■□□□ 1.24
SHROOM3-209ENST00000490690 MYH6P13533 1939 aa22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 JAK2O60674 1132 aa22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 ZNF792Q3KQV3 632 aa22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 FBXO46Q6PJ61 603 aaPredicted RBP22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 REXO1Q8N1G1 1221 aaKnown RBP22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 DAGLBQ8NCG7 672 aa22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 SYTL5Q8TDW5 730 aaPredicted RBP22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 NSUN6Q8TEA1 469 aaKnown RBP22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 IWS1Q96ST2 819 aa22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 VPS54Q9P1Q0 977 aa22.77■■□□□ 1.24
SHROOM3-209ENST00000490690 FDPSP14324 419 aaKnown RBP22.76■■□□□ 1.23
SHROOM3-209ENST00000490690 CYP2B6P20813 491 aa22.76■■□□□ 1.23
SHROOM3-209ENST00000490690 MFSD14CQ5VZR4 134 aa22.76■■□□□ 1.23
SHROOM3-209ENST00000490690 C8orf76Q96K31 380 aa22.76■■□□□ 1.23
SHROOM3-209ENST00000490690 NRBP1Q9UHY1 535 aa22.76■■□□□ 1.23
SHROOM3-209ENST00000490690 PCDHA4Q9UN74 947 aa22.76■■□□□ 1.23
SHROOM3-209ENST00000490690 OPLAHO14841 1288 aa22.75■■□□□ 1.23
SHROOM3-209ENST00000490690 ECM2O94769 699 aaPredicted RBP22.75■■□□□ 1.23
SHROOM3-209ENST00000490690 XRRA1Q6P2D8 792 aa22.75■■□□□ 1.23
SHROOM3-209ENST00000490690 SLC30A10Q6XR72 485 aa22.75■■□□□ 1.23
SHROOM3-209ENST00000490690 MAML3Q96JK9 1138 aa22.75■■□□□ 1.23
SHROOM3-209ENST00000490690 SYNGAP1Q96PV0 1343 aa22.75■■□□□ 1.23
SHROOM3-209ENST00000490690 MGAMO43451 1857 aa22.75■■□□□ 1.23
SHROOM3-209ENST00000490690 MEIS2O14770 477 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 ADCY3O60266 1144 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 COBLO75128 1261 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 PPFIA3O75145 1194 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 HMGCRP04035 888 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 PGK2P07205 417 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 GJB2P29033 226 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 ARHGEF16Q5VV41 709 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 MAMDC4Q6UXC1 1216 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 RMDN3Q96TC7 470 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 PHF20Q9BVI0 1012 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 GABRQQ9UN88 632 aa22.74■■□□□ 1.23
SHROOM3-209ENST00000490690 CASP8AP2Q9UKL3 1982 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 STAM2O75886 525 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 TAL1P17542 331 aaPredicted RBP22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 GRK4P32298 578 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 UBXN2AP68543 259 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 TYW1BQ6NUM6 668 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 BLIDQ8IZY5 108 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 TINF2Q9BSI4 451 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 DAXXQ9UER7 740 aaPredicted RBP22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 CNPY2Q9Y2B0 182 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 PLXNB2O15031 1838 aa22.73■■□□□ 1.23
SHROOM3-209ENST00000490690 KRT2P35908 639 aa22.72■■□□□ 1.23
SHROOM3-209ENST00000490690 ALDH5A1P51649 535 aaPredicted RBP22.72■■□□□ 1.23
SHROOM3-209ENST00000490690 FCHSD1Q86WN1 690 aa22.72■■□□□ 1.23
SHROOM3-209ENST00000490690 FBXO18Q8NFZ0 1043 aa22.72■■□□□ 1.23
SHROOM3-209ENST00000490690 H3BQV1 296 aa22.71■■□□□ 1.23
SHROOM3-209ENST00000490690 MMP1P03956 469 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms