RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 PGK2P07205 417 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 GNAT2P19087 354 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 ADORA2AP29274 412 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 SNAP25P60880 206 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 CCNA1P78396 465 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 PPARAQ07869 468 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 NECAB2Q7Z6G3 386 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 DPP9Q86TI2 863 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 NEDD1Q8NHV4 660 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 LPAR1Q92633 364 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 MKL1Q969V6 931 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 RILPL2Q969X0 211 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 EVI5LQ96CN4 794 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 APBA2Q99767 749 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 NAPBQ9H115 298 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 RWDD1Q9H446 243 aaPredicted RBP8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 IL17RBQ9NRM6 502 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 MTMR4Q9NYA4 1195 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 PPP1R9AQ9ULJ8 1098 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 GREB1LQ9C091 1923 aaPredicted RBP8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 SMCHD1A6NHR9 2005 aa8.71□□□□□ -1.02
PRPF4B-208ENST00000490653 PARP14Q460N5 1801 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 VWA5AO00534 786 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 SIAH2O43255 324 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 FGAP02671 866 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 HOXC6P09630 235 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 CNGA1P29973 690 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 STAT3P40763 770 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 GUCA2AQ02747 115 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 CHD1LQ86WJ1 897 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 RIOX2Q8IUF8 465 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 TDHQ8IZJ6 230 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 SHCBP1Q8NEM2 672 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 RAVER2Q9HCJ3 691 aaKnown RBP8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 ZNF214Q9UL59 606 aaPredicted RBP8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 ROBO3Q96MS0 1386 aa8.7□□□□□ -1.02
PRPF4B-208ENST00000490653 TSPY3P0CV98 308 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 TSPY8P0CW00 308 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 HSPD1P10809 573 aaKnown RBP8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 SDSP20132 328 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 MCCP23508 829 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 HAND2P61296 217 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 NUCB1Q02818 461 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 ZNF792Q3KQV3 632 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 MCMDC2Q4G0Z9 681 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 GJC2Q5T442 439 aaPredicted RBP8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 MFSD14CQ5VZR4 134 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 SLFN13Q68D06 897 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 TRMT44Q8IYL2 757 aaKnown RBP8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 CPXCR1Q8N123 301 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 NACAP1Q9BZK3 213 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 C11orf49Q9H6J7 331 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 SH2D4AQ9H788 454 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 GOPCQ9HD26 462 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 HELLSQ9NRZ9 838 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 MTMR7Q9Y216 660 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 IVNS1ABPQ9Y6Y0 642 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 MYH4Q9Y623 1939 aa8.69□□□□□ -1.02
PRPF4B-208ENST00000490653 STRNO43815 780 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 CYBAP13498 195 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 ALX1Q15699 326 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 LRRFIP1Q32MZ4 808 aaKnown RBP8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 TTBK2Q6IQ55 1244 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 KCTD1Q719H9 257 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 RETREG3Q86VR2 466 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 MB21D1Q8N884 522 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 SYMPKQ92797 1274 aaKnown RBP8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 MAML3Q96JK9 1138 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 MMP19Q99542 508 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 SLF1Q9BQI6 1058 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 IL25Q9H293 177 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 MROH8Q9H579 483 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 DDX20Q9UHI6 824 aaKnown RBP8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 ANAPC4Q9UJX5 808 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 DDX49Q9Y6V7 483 aaKnown RBP8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 A0A0G2JMZ2 1700 aa8.68□□□□□ -1.02
PRPF4B-208ENST00000490653 TMEM232C9JQI7 657 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 RANBP6O60518 1105 aaKnown RBP8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 SLC25A27O95847 323 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 TTLL1O95922 423 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 FGRP09769 529 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 FCER1AP12319 257 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 BMP3P12645 472 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 PDE4BQ07343 736 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 RRP12Q5JTH9 1297 aaKnown RBP8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 OLFML2BQ68BL8 750 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 SNRNP48Q6IEG0 339 aaKnown RBP8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 PTCRAQ6ISU1 281 aaPredicted RBP8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 PRPF38AQ8NAV1 312 aaKnown RBP8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 FGD4Q96M96 766 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 AGBL1Q96MI9 1066 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 FAM161BQ96MY7 647 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 UBE2OQ9C0C9 1292 aaKnown RBP8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 SENP6Q9GZR1 1112 aaPredicted RBP8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 OSBPL3Q9H4L5 887 aa8.67□□□□□ -1.02
PRPF4B-208ENST00000490653 ZNF536O15090 1300 aa8.66□□□□□ -1.02
PRPF4B-208ENST00000490653 TSPY2A6NKD2 308 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms