RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 CCDC174Q6PII3 467 aa18.08■□□□□ 0.48
PCCB-218ENST00000490504 SYNE3Q6ZMZ3 975 aa18.08■□□□□ 0.48
PCCB-218ENST00000490504 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.08■□□□□ 0.48
PCCB-218ENST00000490504 C7orf61Q8IZ16 206 aa18.08■□□□□ 0.48
PCCB-218ENST00000490504 CHAMP1Q96JM3 812 aa18.08■□□□□ 0.48
PCCB-218ENST00000490504 ZKSCAN3Q9BRR0 538 aa18.08■□□□□ 0.48
PCCB-218ENST00000490504 MYH4Q9Y623 1939 aa18.07■□□□□ 0.48
PCCB-218ENST00000490504 COL11A1P12107 1806 aaPredicted RBP18.07■□□□□ 0.48
PCCB-218ENST00000490504 H3BQV1 296 aa18.07■□□□□ 0.48
PCCB-218ENST00000490504 SLC16A2P36021 539 aa18.07■□□□□ 0.48
PCCB-218ENST00000490504 MICU3Q86XE3 530 aa18.07■□□□□ 0.48
PCCB-218ENST00000490504 RAB11FIP4Q86YS3 637 aa18.07■□□□□ 0.48
PCCB-218ENST00000490504 ANKRD35Q8N283 1001 aa18.07■□□□□ 0.48
PCCB-218ENST00000490504 FBXO40Q9UH90 709 aa18.07■□□□□ 0.48
PCCB-218ENST00000490504 NRBP1Q9UHY1 535 aa18.07■□□□□ 0.48
PCCB-218ENST00000490504 FRMPD2Q68DX3 1309 aaPredicted RBP18.07■□□□□ 0.48
PCCB-218ENST00000490504 GOLGA8AA7E2F4 631 aa18.06■□□□□ 0.48
PCCB-218ENST00000490504 PRPF40AO75400 957 aaKnown RBP18.06■□□□□ 0.48
PCCB-218ENST00000490504 CDKL5O76039 1030 aa18.06■□□□□ 0.48
PCCB-218ENST00000490504 ZNF865P0CJ78 1059 aaPredicted RBP18.06■□□□□ 0.48
PCCB-218ENST00000490504 RCAN1P53805 252 aa18.06■□□□□ 0.48
PCCB-218ENST00000490504 LRRC26Q2I0M4 334 aa18.06■□□□□ 0.48
PCCB-218ENST00000490504 GJC2Q5T442 439 aaPredicted RBP18.06■□□□□ 0.48
PCCB-218ENST00000490504 CPLX2Q6PUV4 134 aaKnown RBP18.06■□□□□ 0.48
PCCB-218ENST00000490504 IQCA1Q86XH1 822 aa18.06■□□□□ 0.48
PCCB-218ENST00000490504 FGD4Q96M96 766 aa18.06■□□□□ 0.48
PCCB-218ENST00000490504 ZSCAN10Q96SZ4 725 aaPredicted RBP18.06■□□□□ 0.48
PCCB-218ENST00000490504 GPCPD1Q9NPB8 672 aa18.06■□□□□ 0.48
PCCB-218ENST00000490504 TNKSO95271 1327 aa18.06■□□□□ 0.48
PCCB-218ENST00000490504 DNM1LO00429 736 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 SNAI1O95863 264 aaPredicted RBP18.05■□□□□ 0.48
PCCB-218ENST00000490504 PDHBP11177 359 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 GSE1Q14687 1217 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 SEC23AQ15436 765 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 FOXD4L6Q3SYB3 417 aaPredicted RBP18.05■□□□□ 0.48
PCCB-218ENST00000490504 BTNL9Q6UXG8 535 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 FOXD4L3Q6VB84 417 aaPredicted RBP18.05■□□□□ 0.48
PCCB-218ENST00000490504 TRERF1Q96PN7 1200 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 SENP6Q9GZR1 1112 aaPredicted RBP18.05■□□□□ 0.48
PCCB-218ENST00000490504 ACAD9Q9H845 621 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 RNF146Q9NTX7 359 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 RBM27Q9P2N5 1060 aaKnown RBP18.05■□□□□ 0.48
PCCB-218ENST00000490504 ZMYND8Q9ULU4 1186 aaPredicted RBP18.05■□□□□ 0.48
PCCB-218ENST00000490504 ALAS1P13196 640 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 KLHL40Q2TBA0 621 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 SYDE2Q5VT97 1194 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 MAMDC4Q6UXC1 1216 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 TMEM87AQ8NBN3 555 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 ARRDC4Q8NCT1 418 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 PRO3102Q9H379 93 aa18.05■□□□□ 0.48
PCCB-218ENST00000490504 DDX49Q9Y6V7 483 aaKnown RBP18.05■□□□□ 0.48
PCCB-218ENST00000490504 RANBP2P49792 3224 aaKnown RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 MYH6P13533 1939 aa18.04■□□□□ 0.48
PCCB-218ENST00000490504 MYCNP04198 464 aaPredicted RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 FDPSP14324 419 aaKnown RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 CNTN2Q02246 1040 aa18.04■□□□□ 0.48
PCCB-218ENST00000490504 TKFCQ3LXA3 575 aa18.04■□□□□ 0.48
PCCB-218ENST00000490504 ZNF467Q7Z7K2 595 aaPredicted RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 DGKHQ86XP1 1220 aa18.04■□□□□ 0.48
PCCB-218ENST00000490504 MSL3Q8N5Y2 521 aaKnown RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 RANBP17Q9H2T7 1088 aaKnown RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 A1CFQ9NQ94 594 aaKnown RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 ORC3Q9UBD5 711 aaPredicted RBP18.04■□□□□ 0.48
PCCB-218ENST00000490504 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
PCCB-218ENST00000490504 SNHG28P0DPA3 235 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 RXRAP19793 462 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 ADD1P35611 737 aaKnown RBP18.03■□□□□ 0.48
PCCB-218ENST00000490504 ZNF543Q08ER8 600 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 LRRC41Q15345 812 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 MUM1L1Q5H9M0 696 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 FERMT3Q86UX7 667 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 ZNF654Q8IZM8 581 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 LENG1Q96BZ8 264 aaPredicted RBP18.03■□□□□ 0.48
PCCB-218ENST00000490504 MYL10Q9BUA6 226 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 ZSCAN16Q9H4T2 348 aaPredicted RBP18.03■□□□□ 0.48
PCCB-218ENST00000490504 PCDH10Q9P2E7 1040 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 CCPG1Q9ULG6 757 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 SYNGAP1Q96PV0 1343 aa18.03■□□□□ 0.48
PCCB-218ENST00000490504 POTEB2H3BUK9 544 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 ICAM1P05362 532 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 RARBP10826 455 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 SYN1P17600 705 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 CDC27P30260 824 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 ATN1P54259 1190 aaPredicted RBP18.02■□□□□ 0.48
PCCB-218ENST00000490504 RESTQ13127 1097 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 RTN1Q16799 776 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 CSPP1Q1MSJ5 1256 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 IFIT1BQ5T764 474 aaKnown RBP18.02■□□□□ 0.48
PCCB-218ENST00000490504 CCDC144CPQ8IYA2 1237 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 FAM133AQ8N9E0 248 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 RGS22Q8NE09 1264 aa18.02■□□□□ 0.48
PCCB-218ENST00000490504 FAM217BQ9NTX9 383 aaPredicted RBP18.02■□□□□ 0.48
PCCB-218ENST00000490504 CCDC196A0A1B0GTZ2 297 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 DNM1Q05193 864 aaKnown RBP18.01■□□□□ 0.47
PCCB-218ENST00000490504 ANKS1AQ92625 1134 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 XPNPEP3Q9NQH7 507 aa18.01■□□□□ 0.47
PCCB-218ENST00000490504 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.01■□□□□ 0.47
PCCB-218ENST00000490504 ZHX1Q9UKY1 873 aaPredicted RBP18.01■□□□□ 0.47
PCCB-218ENST00000490504 STK36Q9NRP7 1315 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms