RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 DUSP11O75319 330 aaKnown RBP8.78□□□□□ -1
PDLIM1-203ENST00000490391 PGK2P07205 417 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 CCL23P55773 120 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 GSTO1P78417 241 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 EXOSC9Q06265 439 aaKnown RBP8.78□□□□□ -1
PDLIM1-203ENST00000490391 TCF15Q12870 199 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 COG2Q14746 738 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 TBC1D9Q6ZT07 1266 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 NCAPG2Q86XI2 1143 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 USP44Q9H0E7 712 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 SIL1Q9H173 461 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 UPF3AQ9H1J1 476 aaKnown RBP8.78□□□□□ -1
PDLIM1-203ENST00000490391 HMG20BQ9P0W2 317 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 CEP126Q9P2H0 1117 aa8.78□□□□□ -1
PDLIM1-203ENST00000490391 DIS3Q9Y2L1 958 aaKnown RBP8.78□□□□□ -1
PDLIM1-203ENST00000490391 COL11A1P12107 1806 aaPredicted RBP8.77□□□□□ -1
PDLIM1-203ENST00000490391 MCM3APO60318 1980 aa8.77□□□□□ -1
PDLIM1-203ENST00000490391 PLXNA3P51805 1871 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 USP24Q9UPU5 2620 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 ZBBXA8MT70 800 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 TLR3O15455 904 aaKnown RBP8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 CAPN5O15484 640 aaPredicted RBP8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 SNAI1O95863 264 aaPredicted RBP8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 VSIG8P0DPA2 414 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 FCER1AP12319 257 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 KCNA5P22460 613 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 GUCY1A2P33402 732 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 WNT7BP56706 349 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 SKOR1P84550 965 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 ZP2Q05996 745 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 MB21D1Q8N884 522 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 PCSK9Q8NBP7 692 aaKnown RBP8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 TGFBRAP1Q8WUH2 860 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 BBXQ8WY36 941 aaPredicted RBP8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 MFSD14AQ96MC6 490 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 AGBL1Q96MI9 1066 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 AATFQ9NY61 560 aaKnown RBP eCLIP8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 HOXC10Q9NYD6 342 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 LMCD1Q9NZU5 365 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 MAP1BP46821 2468 aaKnown RBP8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 GRIN2DO15399 1336 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 KMT2EQ8IZD2 1858 aa8.77□□□□□ -1.01
PDLIM1-203ENST00000490391 MYH1P12882 1939 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 A0A1W2PRG0 241 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 C6orf222P0C671 652 aaPredicted RBP8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 GJA9P57773 515 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 TIMM10P62072 90 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 NKX3-2P78367 333 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 PLS1Q14651 629 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 TMEM132BQ14DG7 1078 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 RAB3GAP1Q15042 981 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 KIAA1755Q5JYT7 1200 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 ERMP1Q7Z2K6 904 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 ADGRA1Q86SQ6 560 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 METTL3Q86U44 580 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 RPUSD2Q8IZ73 545 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 GDPD5Q8WTR4 605 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 ATG4CQ96DT6 458 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 SCLYQ96I15 445 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 TRIM34Q9BYJ4 488 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 DAXXQ9UER7 740 aaPredicted RBP8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 FAM184BQ9ULE4 1060 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 CNPY2Q9Y2B0 182 aa8.76□□□□□ -1.01
PDLIM1-203ENST00000490391 FASNP49327 2511 aaKnown RBP8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 LCHNA4D1U4 455 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 IL15P40933 162 aaPredicted RBP8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 GCGRP47871 477 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 HERC6Q8IVU3 1022 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 SPATA5Q8NB90 893 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 PHOSPHO2Q8TCD6 241 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 NEK9Q8TD19 979 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 VTI1AQ96AJ9 217 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 XAGE2Q96GT9 111 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 SLC9A7Q96T83 725 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 MMP19Q99542 508 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 TANGO6Q9C0B7 1094 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 TRPV6Q9H1D0 765 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 FAM86C1Q9NVL1 165 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 RAI14Q9P0K7 980 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 SAP30BPQ9UHR5 308 aaKnown RBP8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 ZNF536O15090 1300 aa8.75□□□□□ -1.01
PDLIM1-203ENST00000490391 A0A1B0GUL7 405 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 B4GALT4O60513 344 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 SLC25A27O95847 323 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 HLA-DOAP06340 250 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 SHMT1P34896 483 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 IRS1P35568 1242 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 ABCB5Q2M3G0 1257 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 GNASQ5JWF2 1037 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 MAMDC4Q6UXC1 1216 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 BMP8AQ7Z5Y6 402 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 MSL3Q8N5Y2 521 aaKnown RBP8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 EHD4Q9H223 541 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 ZHX1Q9UKY1 873 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 ADAMTS5Q9UNA0 930 aa8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 PA2G4Q9UQ80 394 aaKnown RBP8.74□□□□□ -1.01
PDLIM1-203ENST00000490391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms