RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 BMP8BP34820 402 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 NECTIN1Q15223 517 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 KCNA10Q16322 511 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 CCSAPQ6IQ19 270 aaPredicted RBP22.99■■□□□ 1.27
SMC4-222ENST00000490207 TAPT1Q6NXT6 567 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 CATIPQ7Z7H3 387 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 TLK2Q86UE8 772 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 PCSK9Q8NBP7 692 aaKnown RBP22.99■■□□□ 1.27
SMC4-222ENST00000490207 RGS22Q8NE09 1264 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 DNERQ8NFT8 737 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 NUP133Q8WUM0 1156 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 STARD7Q9NQZ5 370 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 PDGFCQ9NRA1 345 aa22.99■■□□□ 1.27
SMC4-222ENST00000490207 GNEQ9Y223 722 aaKnown RBP22.99■■□□□ 1.27
SMC4-222ENST00000490207 MRPL11Q9Y3B7 192 aaKnown RBP22.99■■□□□ 1.27
SMC4-222ENST00000490207 TROAPQ12815 778 aa22.98■■□□□ 1.27
SMC4-222ENST00000490207 IGDCC4Q8TDY8 1250 aa22.98■■□□□ 1.27
SMC4-222ENST00000490207 MTMR8Q96EF0 704 aa22.98■■□□□ 1.27
SMC4-222ENST00000490207 MTA3Q9BTC8 594 aa22.98■■□□□ 1.27
SMC4-222ENST00000490207 AMNQ9BXJ7 453 aa22.98■■□□□ 1.27
SMC4-222ENST00000490207 MAF1Q9H063 256 aa22.98■■□□□ 1.27
SMC4-222ENST00000490207 LY9Q9HBG7 655 aa22.98■■□□□ 1.27
SMC4-222ENST00000490207 PRDM5Q9NQX1 630 aaPredicted RBP22.98■■□□□ 1.27
SMC4-222ENST00000490207 ZBTB5O15062 677 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 ASGR1P07306 291 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 SMPD1P17405 629 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 MCM5P33992 734 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 MDM2Q00987 491 aaPredicted RBP22.97■■□□□ 1.27
SMC4-222ENST00000490207 PDE4DQ08499 809 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 GNASQ5JWF2 1037 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 IQSEC1Q6DN90 963 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 HOMER1Q86YM7 354 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 MCF2L2Q86YR7 1114 aa22.97■■□□□ 1.27
SMC4-222ENST00000490207 CTAGE5O15320 804 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 EDNRBP24530 442 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 NKX3-2P78367 333 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 BEX3Q00994 111 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 SLC35G1Q2M3R5 365 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 RNF20Q5VTR2 975 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 ZNF654Q8IZM8 581 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 TMEM87BQ96K49 555 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 GLT1D1Q96MS3 346 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 LBHD1Q9BQE6 289 aaPredicted RBP22.96■■□□□ 1.27
SMC4-222ENST00000490207 UBE2OQ9C0C9 1292 aaKnown RBP22.96■■□□□ 1.27
SMC4-222ENST00000490207 AP5M1Q9H0R1 490 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 PDLIM7Q9NR12 457 aa22.96■■□□□ 1.27
SMC4-222ENST00000490207 BAZ2BQ9UIF8 2168 aaKnown RBP22.96■■□□□ 1.27
SMC4-222ENST00000490207 B4DLN1 442 aa22.95■■□□□ 1.26
SMC4-222ENST00000490207 SH2B2O14492 632 aaPredicted RBP22.95■■□□□ 1.26
SMC4-222ENST00000490207 PPP1R11O60927 126 aaPredicted RBP22.95■■□□□ 1.26
SMC4-222ENST00000490207 DDAH1O94760 285 aa22.95■■□□□ 1.26
SMC4-222ENST00000490207 PTGS1P23219 599 aa22.95■■□□□ 1.26
SMC4-222ENST00000490207 MRPL12P52815 198 aaKnown RBP22.95■■□□□ 1.26
SMC4-222ENST00000490207 TLE2Q04725 743 aa22.95■■□□□ 1.26
SMC4-222ENST00000490207 KIAA1217Q5T5P2 1943 aa22.95■■□□□ 1.26
SMC4-222ENST00000490207 SYTL5Q8TDW5 730 aaPredicted RBP22.95■■□□□ 1.26
SMC4-222ENST00000490207 TBC1D5Q92609 795 aa22.95■■□□□ 1.26
SMC4-222ENST00000490207 PIGSQ96S52 555 aa22.95■■□□□ 1.26
SMC4-222ENST00000490207 RIOX1Q9H6W3 641 aa22.95■■□□□ 1.26
SMC4-222ENST00000490207 GPHNQ9NQX3 736 aaPredicted RBP22.95■■□□□ 1.26
SMC4-222ENST00000490207 ELP1O95163 1332 aa22.94■■□□□ 1.26
SMC4-222ENST00000490207 PQBP1O60828 265 aaKnown RBP22.94■■□□□ 1.26
SMC4-222ENST00000490207 FSCN1Q16658 493 aaKnown RBP22.94■■□□□ 1.26
SMC4-222ENST00000490207 TMEM63BQ5T3F8 832 aa22.94■■□□□ 1.26
SMC4-222ENST00000490207 NFXL1Q6ZNB6 911 aa22.94■■□□□ 1.26
SMC4-222ENST00000490207 MYL10Q9BUA6 226 aa22.94■■□□□ 1.26
SMC4-222ENST00000490207 COL20A1Q9P218 1284 aa22.94■■□□□ 1.26
SMC4-222ENST00000490207 Q9Y3F1 56 aa22.94■■□□□ 1.26
SMC4-222ENST00000490207 RBM47A0AV96 593 aaKnown RBP22.93■■□□□ 1.26
SMC4-222ENST00000490207 CCDC69A6NI79 296 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 DYNC1LI2O43237 492 aaPredicted RBP22.93■■□□□ 1.26
SMC4-222ENST00000490207 CYTH3O43739 400 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 CFBP00751 764 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 CLTBP09497 229 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 COL9A3Q14050 684 aaPredicted RBP22.93■■□□□ 1.26
SMC4-222ENST00000490207 DUSP28Q4G0W2 176 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 TDHQ8IZJ6 230 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 CTCFLQ8NI51 663 aaPredicted RBP22.93■■□□□ 1.26
SMC4-222ENST00000490207 VTI1AQ96AJ9 217 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 TAAR1Q96RJ0 339 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 MAP3K14Q99558 947 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 WDR11Q9BZH6 1224 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 PCDHA1Q9Y5I3 950 aa22.93■■□□□ 1.26
SMC4-222ENST00000490207 MROH7Q68CQ1 1323 aa22.92■■□□□ 1.26
SMC4-222ENST00000490207 A0A0U1RQG5 324 aaPredicted RBP22.92■■□□□ 1.26
SMC4-222ENST00000490207 OPLAHO14841 1288 aa22.92■■□□□ 1.26
SMC4-222ENST00000490207 ZEB2O60315 1214 aa22.92■■□□□ 1.26
SMC4-222ENST00000490207 KIF5BP33176 963 aa22.92■■□□□ 1.26
SMC4-222ENST00000490207 PPP2R5BQ15173 497 aa22.92■■□□□ 1.26
SMC4-222ENST00000490207 SH3RF1Q7Z6J0 888 aa22.92■■□□□ 1.26
SMC4-222ENST00000490207 TMTC2Q8N394 836 aa22.92■■□□□ 1.26
SMC4-222ENST00000490207 NSUN6Q8TEA1 469 aaKnown RBP22.92■■□□□ 1.26
SMC4-222ENST00000490207 LIFRP42702 1097 aa22.91■■□□□ 1.26
SMC4-222ENST00000490207 TRAF1Q13077 416 aa22.91■■□□□ 1.26
SMC4-222ENST00000490207 ANKRD33Q7Z3H0 272 aa22.91■■□□□ 1.26
SMC4-222ENST00000490207 SCFD2Q8WU76 684 aa22.91■■□□□ 1.26
SMC4-222ENST00000490207 RMDN3Q96TC7 470 aa22.91■■□□□ 1.26
SMC4-222ENST00000490207 LRRC2Q9BYS8 371 aa22.91■■□□□ 1.26
SMC4-222ENST00000490207 PNMA6FA0A0J9YX94 578 aa22.9■■□□□ 1.26
SMC4-222ENST00000490207 TRIM43BA6NCK2 446 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms