RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SPC25Q9HBM1 224 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 SYNRGQ9UMZ2 1314 aa12.27□□□□□ -0.45
SCAMP4-208ENST00000489554 ERICH2A1L162 156 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 PTPDC1A2A3K4 754 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 MOXD2PA6NHM9 499 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 NFIBO00712 420 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 CST5P28325 142 aaPredicted RBP12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 ST3GAL1Q11201 340 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 BAATQ14032 418 aaPredicted RBP12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 SART3Q15020 963 aaKnown RBP12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 SGMS1Q86VZ5 419 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 ADGRF4Q8IZF3 695 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 KLHDC9Q8NEP7 349 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 MORC4Q8TE76 937 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 CLEC4DQ8WXI8 215 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 FERMT2Q96AC1 680 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 LENG1Q96BZ8 264 aaPredicted RBP12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 TMEM87BQ96K49 555 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 UBA5Q9GZZ9 404 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 PRKAG2Q9UGJ0 569 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 ATP11BQ9Y2G3 1177 aa12.26□□□□□ -0.45
SCAMP4-208ENST00000489554 A0A1W2PQ45 241 aaPredicted RBP12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 A0A1W2PQY0 241 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 IFIT3O14879 490 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 DHX16O60231 1041 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 LIFRP42702 1097 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 MAGEA10P43363 369 aaPredicted RBP12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 GJA9P57773 515 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 TNFAIP2Q03169 654 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 CDC37Q16543 378 aaPredicted RBP12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 PCSK9Q8NBP7 692 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 RGS22Q8NE09 1264 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 IL27Q8NEV9 243 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 NUP133Q8WUM0 1156 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 BRF1Q92994 677 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 MPHOSPH6Q99547 160 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 UPF3AQ9H1J1 476 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 VTA1Q9NP79 307 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 TPCN1Q9ULQ1 816 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 ASTN1O14525 1302 aa12.25□□□□□ -0.45
SCAMP4-208ENST00000489554 B4DLN1 442 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 ADCY6O43306 1168 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 ABCB11O95342 1321 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 C6orf222P0C671 652 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 CALML3P27482 149 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 ALDH5A1P51649 535 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 MRPL12P52815 198 aaKnown RBP12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 ACLYP53396 1101 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 RPS6P62753 249 aaKnown RBP12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 NKX3-2P78367 333 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 APOBRQ0VD83 1088 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 NID2Q14112 1375 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 BECN1Q14457 450 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 USH1GQ495M9 461 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 TRIM60Q495X7 471 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 TMEM67Q5HYA8 995 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 IQSEC1Q6DN90 963 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 CCSAPQ6IQ19 270 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 SLC30A10Q6XR72 485 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 DNERQ8NFT8 737 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 LBHD1Q9BQE6 289 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 CPVLQ9H3G5 476 aa12.24□□□□□ -0.45
SCAMP4-208ENST00000489554 TRIOBPQ9H2D6 2365 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 KLRF2D3W0D1 207 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 ST18O60284 1047 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 WTAPQ15007 396 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 KCNA10Q16322 511 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 ME3Q16798 604 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 QRICH1Q2TAL8 776 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 GNASQ5JWF2 1037 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 APOA5Q6Q788 366 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 NOL8Q76FK4 1167 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 FBXO11Q86XK2 927 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 MCF2L2Q86YR7 1114 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 FBXO16Q8IX29 292 aaPredicted RBP12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 GLT1D1Q96MS3 346 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 UBE2OQ9C0C9 1292 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 JMJD4Q9H9V9 463 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 STARD7Q9NQZ5 370 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 GNEQ9Y223 722 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 MRPL11Q9Y3B7 192 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 Q9Y3F1 56 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 SMCHD1A6NHR9 2005 aa12.23□□□□□ -0.45
SCAMP4-208ENST00000489554 ELP1O95163 1332 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 MYADML2A6NDP7 307 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 ASGR1P07306 291 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 PDIA3P30101 505 aaKnown RBP12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 TLE2Q04725 743 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 PDE4DQ08499 809 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 TRAF1Q13077 416 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 GRM4Q14833 912 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 TAPT1Q6NXT6 567 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 EEPD1Q7L9B9 569 aa12.22□□□□□ -0.45
SCAMP4-208ENST00000489554 CATIPQ7Z7H3 387 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms