RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 GPSM3Q9Y4H4 160 aa9.46□□□□□ -0.9
EXOSC3-206ENST00000489414 C2CD3Q4AC94 2353 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 UBR5O95071 2799 aaPredicted RBP9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 ABHD14A-ACY1A0A1B0GW23 586 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 PYGBP11216 843 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 HOXD8P13378 290 aaPredicted RBP9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 SMPD1P17405 629 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 SP100P23497 879 aaPredicted RBP9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 TCTN1Q2MV58 587 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 CWF19L2Q2TBE0 894 aaKnown RBP9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 CC2D1BQ5T0F9 858 aaKnown RBP9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 CNKSR3Q6P9H4 555 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 WDR66Q8TBY9 1149 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 SPATA18Q8TC71 538 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 WASF3Q9UPY6 502 aa9.45□□□□□ -0.9
EXOSC3-206ENST00000489414 MCM3APO60318 1980 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 C5orf67F2Z3F1 127 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 GRM6O15303 877 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 CCDC6Q16204 474 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 LRRFIP1Q32MZ4 808 aaKnown RBP9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 CCDC144BQ3MJ40 725 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 SPNS2Q8IVW8 549 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 RETREG2Q8NC44 543 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 MARVELD3Q96A59 401 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 ZNF594Q96JF6 807 aaPredicted RBP9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 CNNM1Q9NRU3 951 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 GINM1Q9NU53 330 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 MAP3K2Q9Y2U5 619 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 ASTN1O14525 1302 aa9.44□□□□□ -0.9
EXOSC3-206ENST00000489414 ASXL3Q9C0F0 2248 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 EFCAB14O75071 495 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 NTRK1P04629 796 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 ACVR2BQ13705 512 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 ZYXQ15942 572 aaKnown RBP9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 MAMDC4Q6UXC1 1216 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 C1orf210Q8IVY1 113 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 MAP4K1Q92918 833 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 MMP19Q99542 508 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 EPC1Q9H2F5 836 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 ERVK-5Q9HDB9 667 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 RXFP3Q9NSD7 469 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 ZBTB21Q9ULJ3 1066 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 PCDHB8Q9UN66 801 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 NR2E1Q9Y466 385 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 RAI2Q9Y5P3 530 aa9.43□□□□□ -0.9
EXOSC3-206ENST00000489414 MAPK8IP3Q9UPT6 1336 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 TM4SF5O14894 197 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 SNPHO15079 494 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 C1QL1O75973 258 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 CXCL10P02778 98 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 MMP1P03956 469 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 ASGR2P07307 311 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 CAMK1Q14012 370 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 FSCN1Q16658 493 aaKnown RBP9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 C19orf48Q6RUI8 117 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 ADGRD2Q7Z7M1 963 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 MAML2Q8IZL2 1156 aaPredicted RBP9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 CFAP53Q96M91 514 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 C11orf84Q9BUA3 381 aaPredicted RBP9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 RPAP3Q9H6T3 665 aaPredicted RBP9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 TICRRQ7Z2Z1 1910 aa9.42□□□□□ -0.9
EXOSC3-206ENST00000489414 C2CD4DB7Z1M9 353 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 GDF11O95390 407 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 DDX58O95786 925 aaKnown RBP9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 LDHBP07195 334 aaKnown RBP9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 USP14P54578 494 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 TBC1D8BQ0IIM8 1120 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 SPEM2Q0P670 501 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 BFSP2Q13515 415 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 ZNF528Q3MIS6 628 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 MB21D1Q8N884 522 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 PPP2R3CQ969Q6 453 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 PLEKHF1Q96S99 279 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 DNAJC18Q9H819 358 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 GMEB2Q9UKD1 530 aa9.41□□□□□ -0.9
EXOSC3-206ENST00000489414 GDF9O60383 454 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 PRB1P04280 392 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 RB1P06400 928 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 LINC00271P0C7V0 271 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 NCLP19338 710 aaKnown RBP9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 RHBDL3P58872 404 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 FOXO4P98177 505 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 PLS1Q14651 629 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 COG2Q14746 738 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 COL28A1Q2UY09 1125 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.4□□□□□ -0.97e-8■■□□□ 12.7
EXOSC3-206ENST00000489414 SIX5Q8N196 739 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 RUNDC1Q96C34 613 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 FEZ1Q99689 392 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 KIAA1683Q9H0B3 1180 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 ABHD16BQ9H3Z7 469 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 HOXC10Q9NYD6 342 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 DLGAP2Q9P1A6 1054 aa9.4□□□□□ -0.9
EXOSC3-206ENST00000489414 PCDHGA2Q9Y5H1 932 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms