RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
CD40-206ENST00000489304 SYMPKQ92797 1274 aaKnown RBP20.49■□□□□ 0.87
CD40-206ENST00000489304 OTUD5Q96G74 571 aa20.49■□□□□ 0.87
CD40-206ENST00000489304 EPSTI1Q96J88 318 aa20.49■□□□□ 0.87
CD40-206ENST00000489304 MEIS2O14770 477 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 OPLAHO14841 1288 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 POLR2DO15514 142 aaKnown RBP20.48■□□□□ 0.87
CD40-206ENST00000489304 CAVIN2O95810 425 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 AP3B2Q13367 1082 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 SH3D19Q5HYK7 790 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 DTHD1Q6ZMT9 781 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 ARMC9Q7Z3E5 817 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 LDHDQ86WU2 507 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 PRPF38AQ8NAV1 312 aaKnown RBP20.48■□□□□ 0.87
CD40-206ENST00000489304 WNK4Q96J92 1243 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 ZNF536O15090 1300 aa20.48■□□□□ 0.87
CD40-206ENST00000489304 NEMFO60524 1076 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 STX1AQ16623 288 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 ANO6Q4KMQ2 910 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 CNNM3Q8NE01 707 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 AGBL1Q96MI9 1066 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 P2RX7Q99572 595 aaKnown RBP20.47■□□□□ 0.87
CD40-206ENST00000489304 TMOD4Q9NZQ9 345 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 PPP1R9AQ9ULJ8 1098 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 OR52Z1P0C646 297 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 MDM2Q00987 491 aaPredicted RBP20.47■□□□□ 0.87
CD40-206ENST00000489304 LDLRAD1Q5T700 205 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 PPP4R3AQ6IN85 833 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 KANK3Q6NY19 840 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 ERO1BQ86YB8 467 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 FAM200AQ8TCP9 573 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 TBC1D5Q92609 795 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 ATG4CQ96DT6 458 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 NAP1L4Q99733 375 aaKnown RBP20.47■□□□□ 0.87
CD40-206ENST00000489304 USP25Q9UHP3 1055 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 SERTAD1Q9UHV2 236 aa20.47■□□□□ 0.87
CD40-206ENST00000489304 A0A087X0B3 334 aa20.46■□□□□ 0.87
CD40-206ENST00000489304 SPDYE5A6NIY4 337 aa20.46■□□□□ 0.87
CD40-206ENST00000489304 IRF6O14896 467 aa20.46■□□□□ 0.87
CD40-206ENST00000489304 ACTN4O43707 911 aaKnown RBP20.46■□□□□ 0.87
CD40-206ENST00000489304 FOSP01100 380 aaPredicted RBP20.46■□□□□ 0.87
CD40-206ENST00000489304 PYM1Q9BRP8 204 aaKnown RBP20.46■□□□□ 0.87
CD40-206ENST00000489304 RAVER2Q9HCJ3 691 aaKnown RBP20.46■□□□□ 0.87
CD40-206ENST00000489304 ANO10Q9NW15 660 aa20.46■□□□□ 0.87
CD40-206ENST00000489304 HOOK1Q9UJC3 728 aaKnown RBP20.46■□□□□ 0.87
CD40-206ENST00000489304 TUBE1Q9UJT0 475 aa20.46■□□□□ 0.87
CD40-206ENST00000489304 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
CD40-206ENST00000489304 GCFC2P16383 781 aaKnown RBP20.45■□□□□ 0.86
CD40-206ENST00000489304 GJA5P36382 358 aa20.45■□□□□ 0.86
CD40-206ENST00000489304 PPATQ06203 517 aa20.45■□□□□ 0.86
CD40-206ENST00000489304 TREML2Q5T2D2 321 aa20.45■□□□□ 0.86
CD40-206ENST00000489304 CATSPERGQ6ZRH7 1159 aa20.45■□□□□ 0.86
CD40-206ENST00000489304 ERCC4Q92889 916 aaPredicted RBP20.45■□□□□ 0.86
CD40-206ENST00000489304 MTMR9Q96QG7 549 aa20.45■□□□□ 0.86
CD40-206ENST00000489304 ANO3Q9BYT9 981 aa20.45■□□□□ 0.86
CD40-206ENST00000489304 USP11P51784 963 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 CPXCR1Q8N123 301 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 PDILTQ8N807 584 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 ANP32BQ92688 251 aaKnown RBP20.44■□□□□ 0.86
CD40-206ENST00000489304 OPTNQ96CV9 577 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 AK8Q96MA6 479 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 SLC38A10Q9HBR0 1119 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 RLFQ13129 1914 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 ABCB11O95342 1321 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 TDP2O95551 362 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 SLFN14P0C7P3 912 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 DSG3P32926 999 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 RBM46Q8TBY0 533 aaKnown RBP20.44■□□□□ 0.86
CD40-206ENST00000489304 CRYGNQ8WXF5 182 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 DNAJC25Q9H1X3 360 aa20.44■□□□□ 0.86
CD40-206ENST00000489304 MRPL11Q9Y3B7 192 aaKnown RBP20.44■□□□□ 0.86
CD40-206ENST00000489304 ICAM1P05362 532 aa20.43■□□□□ 0.86
CD40-206ENST00000489304 HOXA13P31271 388 aaPredicted RBP20.43■□□□□ 0.86
CD40-206ENST00000489304 PNOCQ13519 176 aa20.43■□□□□ 0.86
CD40-206ENST00000489304 MOXD1Q6UVY6 613 aa20.43■□□□□ 0.86
CD40-206ENST00000489304 GADL1Q6ZQY3 521 aa20.43■□□□□ 0.86
CD40-206ENST00000489304 DHX58Q96C10 678 aa20.43■□□□□ 0.86
CD40-206ENST00000489304 CCPG1Q9ULG6 757 aa20.43■□□□□ 0.86
CD40-206ENST00000489304 PTPRFP10586 1907 aa20.43■□□□□ 0.86
CD40-206ENST00000489304 CYP3A7-CYP3A51PA0A087WV96 503 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.42■□□□□ 0.86
CD40-206ENST00000489304 A0A0G2JLL6 359 aaPredicted RBP20.42■□□□□ 0.86
CD40-206ENST00000489304 VWA5AO00534 786 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 SLC37A4O43826 429 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 CYP3A7P24462 503 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 TXLNAP40222 546 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 E2F4Q16254 413 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 CALCRLQ16602 461 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 SH3RF1Q7Z6J0 888 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 PRRT2Q7Z6L0 340 aaPredicted RBP20.42■□□□□ 0.86
CD40-206ENST00000489304 REPS2Q8NFH8 660 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 CCDC34Q96HJ3 373 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 MBOAT7Q96N66 472 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 CCSER1Q9C0I3 900 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 CBX8Q9HC52 389 aa20.42■□□□□ 0.86
CD40-206ENST00000489304 FOXN1O15353 648 aa20.41■□□□□ 0.86
CD40-206ENST00000489304 ZBED4O75132 1171 aa20.41■□□□□ 0.86
CD40-206ENST00000489304 CELF2O95319 508 aaKnown RBP20.41■□□□□ 0.86
CD40-206ENST00000489304 FDX1P10109 184 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms