RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 GULP1Q9UBP9 304 aa5.87□□□□□ -1.47
RFC4-213ENST00000489028 MBD1Q9UIS9 605 aaPredicted RBP5.87□□□□□ -1.47
RFC4-213ENST00000489028 PLA2G2DQ9UNK4 145 aa5.87□□□□□ -1.47
RFC4-213ENST00000489028 RWDD3Q9Y3V2 267 aa5.87□□□□□ -1.47
RFC4-213ENST00000489028 A0A1W2PQ27 194 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 A0A1W2PQ64 194 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 A0A1W2PQC6 194 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 A0A1W2PQD8 194 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 HRKO00198 91 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 SCG5P05408 212 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 GLDCP23378 1020 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 ECI1P42126 302 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 RAP1GAPP47736 663 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 EPHB3P54753 998 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 GFRA1P56159 465 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 PPP2R2AP63151 447 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 DLG4P78352 724 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 CBX2Q14781 532 aaPredicted RBP5.86□□□□□ -1.47
RFC4-213ENST00000489028 PKN1Q16512 942 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 PLEKHN1Q494U1 663 aaPredicted RBP5.86□□□□□ -1.47
RFC4-213ENST00000489028 BICRALQ6AI39 1079 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 CKAP2LQ8IYA6 745 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 DPF3Q92784 378 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 KCNN1Q92952 543 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 C1orf159Q96HA4 380 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 EPN3Q9H201 632 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 CNTD2Q9H8S5 307 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 MSRB2Q9Y3D2 182 aa5.86□□□□□ -1.47
RFC4-213ENST00000489028 NFIBO00712 420 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 SRGAP3O43295 1099 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 SEMA7AO75326 666 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 SNRPB2P08579 225 aaKnown RBP5.85□□□□□ -1.47
RFC4-213ENST00000489028 TMEM253P0C7T8 217 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 GLI4P10075 376 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 HOXC12P31275 282 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 GTF2F1P35269 517 aaKnown RBP eCLIP5.85□□□□□ -1.47
RFC4-213ENST00000489028 CDR1P51861 262 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 TMC6Q7Z403 805 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 C1QL4Q86Z23 238 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 TMEM145Q8NBT3 493 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 MMP19Q99542 508 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 TRIM55Q9BYV6 548 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 RXFP1Q9HBX9 757 aa5.85□□□□□ -1.47
RFC4-213ENST00000489028 SMG5Q9UPR3 1016 aaKnown RBP5.85□□□□□ -1.47
RFC4-213ENST00000489028 DBX1A6NMT0 343 aa5.84□□□□□ -1.47
RFC4-213ENST00000489028 NPIPB6E9PJ23 425 aa5.84□□□□□ -1.47
RFC4-213ENST00000489028 TMEM132EQ6IEE7 984 aa5.84□□□□□ -1.47
RFC4-213ENST00000489028 LZTR1Q8N653 840 aa5.84□□□□□ -1.47
RFC4-213ENST00000489028 ARHGEF4Q9NR80 690 aa5.84□□□□□ -1.47
RFC4-213ENST00000489028 FBXL7Q9UJT9 491 aa5.84□□□□□ -1.47
RFC4-213ENST00000489028 TRBV23OR9-2A0A075B6M9 112 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 ZC3H12DA2A288 527 aaKnown RBP5.83□□□□□ -1.48
RFC4-213ENST00000489028 TCAF2A6NFQ2 919 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 NPHS1O60500 1241 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 CYBBP04839 570 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 CFPP27918 469 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 KCNJ6P48051 423 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 MAPKAPK2P49137 400 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 SERINC3Q13530 473 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 SSPNQ14714 243 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 SLC35F1Q5T1Q4 408 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 PAQR3Q6TCH7 311 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 SPATC1Q76KD6 591 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 PLEKHO2Q8TD55 490 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 SIRT5Q9NXA8 310 aa5.83□□□□□ -1.48
RFC4-213ENST00000489028 A0A1W2PQJ5 194 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 ABLIM1O14639 778 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 DLX3O60479 287 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 LCP1P13796 627 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 FBLN1P23142 703 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 NCKAP1LP55160 1127 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 LINC00310P59036 64 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 ZNF200P98182 395 aaPredicted RBP5.82□□□□□ -1.48
RFC4-213ENST00000489028 RBL2Q08999 1139 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 NR1I3Q14994 352 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 TESK1Q15569 626 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 KCNA10Q16322 511 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 NLRP10Q86W26 655 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 IGDCC3Q8IVU1 814 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 PPIL6Q8IXY8 311 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 ST13P5Q8NFI4 369 aaPredicted RBP5.82□□□□□ -1.48
RFC4-213ENST00000489028 IER2Q9BTL4 223 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 BCAS3Q9H6U6 928 aa5.82□□□□□ -1.48
RFC4-213ENST00000489028 PPP1R1BQ9UD71 204 aaPredicted RBP5.82□□□□□ -1.48
RFC4-213ENST00000489028 CCDC85CA6NKD9 419 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 F8W031 263 aaPredicted RBP5.81□□□□□ -1.48
RFC4-213ENST00000489028 AGRPO00253 132 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 MEFVO15553 781 aaPredicted RBP5.81□□□□□ -1.48
RFC4-213ENST00000489028 CPP00450 1065 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 FUCA1P04066 466 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 FPR2P25090 351 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 PRR5P85299 388 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 ACBD5Q5T8D3 534 aaPredicted RBP5.81□□□□□ -1.48
RFC4-213ENST00000489028 YOD1Q5VVQ6 348 aaPredicted RBP5.81□□□□□ -1.48
RFC4-213ENST00000489028 NBPF6Q5VWK0 638 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 E4F1Q66K89 784 aaPredicted RBP5.81□□□□□ -1.48
RFC4-213ENST00000489028 ZC3H14Q6PJT7 736 aaKnown RBP5.81□□□□□ -1.48
RFC4-213ENST00000489028 LDHDQ86WU2 507 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 ANKLE2Q86XL3 938 aa5.81□□□□□ -1.48
RFC4-213ENST00000489028 TEX2Q8IWB9 1127 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms