RNA–Protein interactions for RNA: ENST00000488835.5

SSPO-208, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 497 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-208ENST00000488835 CCSAPQ6IQ19 270 aaPredicted RBP17.28■□□□□ 0.36
SSPO-208ENST00000488835 DNERQ8NFT8 737 aa17.28■□□□□ 0.36
SSPO-208ENST00000488835 IGDCC4Q8TDY8 1250 aa17.28■□□□□ 0.36
SSPO-208ENST00000488835 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
SSPO-208ENST00000488835 AMNQ9BXJ7 453 aa17.28■□□□□ 0.36
SSPO-208ENST00000488835 STARD7Q9NQZ5 370 aa17.28■□□□□ 0.36
SSPO-208ENST00000488835 PDGFCQ9NRA1 345 aa17.28■□□□□ 0.36
SSPO-208ENST00000488835 MRPL11Q9Y3B7 192 aaKnown RBP17.28■□□□□ 0.36
SSPO-208ENST00000488835 PRC1O43663 620 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 SMPD1P17405 629 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 MCM5P33992 734 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 PDE4DQ08499 809 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 TROAPQ12815 778 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 GNASQ5JWF2 1037 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 RNF20Q5VTR2 975 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 TAPT1Q6NXT6 567 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 TLK2Q86UE8 772 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 GLT1D1Q96MS3 346 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 MTA3Q9BTC8 594 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 AP5M1Q9H0R1 490 aa17.27■□□□□ 0.36
SSPO-208ENST00000488835 PRDM5Q9NQX1 630 aaPredicted RBP17.27■□□□□ 0.36
SSPO-208ENST00000488835 CEP290O15078 2479 aa17.27■□□□□ 0.35
SSPO-208ENST00000488835 ZBTB5O15062 677 aa17.26■□□□□ 0.35
SSPO-208ENST00000488835 ASGR1P07306 291 aa17.26■□□□□ 0.35
SSPO-208ENST00000488835 NKX3-2P78367 333 aa17.26■□□□□ 0.35
SSPO-208ENST00000488835 IRX5P78411 483 aaPredicted RBP17.26■□□□□ 0.35
SSPO-208ENST00000488835 MDM2Q00987 491 aaPredicted RBP17.26■□□□□ 0.35
SSPO-208ENST00000488835 TLE2Q04725 743 aa17.26■□□□□ 0.35
SSPO-208ENST00000488835 MTMR8Q96EF0 704 aa17.26■□□□□ 0.35
SSPO-208ENST00000488835 UBE2OQ9C0C9 1292 aaKnown RBP17.26■□□□□ 0.35
SSPO-208ENST00000488835 GNEQ9Y223 722 aaKnown RBP17.26■□□□□ 0.35
SSPO-208ENST00000488835 DYNC1LI2O43237 492 aaPredicted RBP17.25■□□□□ 0.35
SSPO-208ENST00000488835 EDNRBP24530 442 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 TRAF1Q13077 416 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 HOMER1Q86YM7 354 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 TMTC2Q8N394 836 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 SYTL5Q8TDW5 730 aaPredicted RBP17.25■□□□□ 0.35
SSPO-208ENST00000488835 TBC1D5Q92609 795 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 VTI1AQ96AJ9 217 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 TMEM87BQ96K49 555 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 LY9Q9HBG7 655 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 Q9Y3F1 56 aa17.25■□□□□ 0.35
SSPO-208ENST00000488835 ELP1O95163 1332 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 CTAGE5O15320 804 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 PQBP1O60828 265 aaKnown RBP17.24■□□□□ 0.35
SSPO-208ENST00000488835 DDAH1O94760 285 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 KIF5BP33176 963 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 BEX3Q00994 111 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 FSCN1Q16658 493 aaKnown RBP17.24■□□□□ 0.35
SSPO-208ENST00000488835 ZNF654Q8IZM8 581 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 CTCFLQ8NI51 663 aaPredicted RBP17.24■□□□□ 0.35
SSPO-208ENST00000488835 NSUN6Q8TEA1 469 aaKnown RBP17.24■□□□□ 0.35
SSPO-208ENST00000488835 PIGSQ96S52 555 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 MAP3K14Q99558 947 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 RIOX1Q9H6W3 641 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 GPHNQ9NQX3 736 aaPredicted RBP17.24■□□□□ 0.35
SSPO-208ENST00000488835 PDLIM7Q9NR12 457 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 PCDHA1Q9Y5I3 950 aa17.24■□□□□ 0.35
SSPO-208ENST00000488835 RBM47A0AV96 593 aaKnown RBP17.23■□□□□ 0.35
SSPO-208ENST00000488835 CCDC69A6NI79 296 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
SSPO-208ENST00000488835 ZEB2O60315 1214 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 PPP1R11O60927 126 aaPredicted RBP17.23■□□□□ 0.35
SSPO-208ENST00000488835 CFBP00751 764 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 CLTBP09497 229 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 SLC35G1Q2M3R5 365 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 DUSP28Q4G0W2 176 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 TMEM63BQ5T3F8 832 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 ANKRD33Q7Z3H0 272 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 SCFD2Q8WU76 684 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 LRRC37A2A6NM11 1700 aa17.23■□□□□ 0.35
SSPO-208ENST00000488835 PNMA6FA0A0J9YX94 578 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 PTGS1P23219 599 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 PPP2R5BQ15173 497 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 CXCL17Q6UXB2 119 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 TDHQ8IZJ6 230 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 TOX2Q96NM4 488 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 TAAR1Q96RJ0 339 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 RMDN3Q96TC7 470 aa17.22■□□□□ 0.35
SSPO-208ENST00000488835 MROH7Q68CQ1 1323 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 A0A0U1RQG5 324 aaPredicted RBP17.21■□□□□ 0.35
SSPO-208ENST00000488835 TRIM43BA6NCK2 446 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 CYTH3O43739 400 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 CABYRO75952 493 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 CALM1P0DP23 149 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 CALM2P0DP24 149 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 CALM3P0DP25 149 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 LIFRP42702 1097 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 GNAQP50148 359 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 HSD17B4P51659 736 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 ARHGEF16Q5VV41 709 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 SH3RF1Q7Z6J0 888 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 TRIM43Q96BQ3 446 aaPredicted RBP17.21■□□□□ 0.35
SSPO-208ENST00000488835 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
SSPO-208ENST00000488835 IWS1Q96ST2 819 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms