RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 FGRP09769 529 aa22.49■■□□□ 1.19
GGPS1-206ENST00000488594 CPT1AP50416 773 aa22.49■■□□□ 1.19
GGPS1-206ENST00000488594 ALDH5A1P51649 535 aaPredicted RBP22.49■■□□□ 1.19
GGPS1-206ENST00000488594 BAATQ14032 418 aaPredicted RBP22.49■■□□□ 1.19
GGPS1-206ENST00000488594 WDR11Q9BZH6 1224 aa22.49■■□□□ 1.19
GGPS1-206ENST00000488594 INCENPQ9NQS7 918 aa22.49■■□□□ 1.19
GGPS1-206ENST00000488594 TOP1P11387 765 aaKnown RBP22.48■■□□□ 1.19
GGPS1-206ENST00000488594 TMEM63BQ5T3F8 832 aa22.48■■□□□ 1.19
GGPS1-206ENST00000488594 SYDE2Q5VT97 1194 aa22.48■■□□□ 1.19
GGPS1-206ENST00000488594 RASGRP2Q7LDG7 609 aa22.48■■□□□ 1.19
GGPS1-206ENST00000488594 IL27Q8NEV9 243 aa22.48■■□□□ 1.19
GGPS1-206ENST00000488594 PURBQ96QR8 312 aaKnown RBP22.48■■□□□ 1.19
GGPS1-206ENST00000488594 MPHOSPH6Q99547 160 aaKnown RBP22.48■■□□□ 1.19
GGPS1-206ENST00000488594 TSPYL2Q9H2G4 693 aaPredicted RBP22.48■■□□□ 1.19
GGPS1-206ENST00000488594 GPHNQ9NQX3 736 aaPredicted RBP22.48■■□□□ 1.19
GGPS1-206ENST00000488594 RBM47A0AV96 593 aaKnown RBP22.47■■□□□ 1.19
GGPS1-206ENST00000488594 SLC16A2P36021 539 aa22.47■■□□□ 1.19
GGPS1-206ENST00000488594 PURAQ00577 322 aaKnown RBP22.47■■□□□ 1.19
GGPS1-206ENST00000488594 ALX1Q15699 326 aa22.47■■□□□ 1.19
GGPS1-206ENST00000488594 CCDC85BQ15834 202 aaPredicted RBP22.47■■□□□ 1.19
GGPS1-206ENST00000488594 BRDTQ58F21 947 aaPredicted RBP22.47■■□□□ 1.19
GGPS1-206ENST00000488594 PPP2R2DQ66LE6 453 aa22.47■■□□□ 1.19
GGPS1-206ENST00000488594 TNKSO95271 1327 aa22.47■■□□□ 1.19
GGPS1-206ENST00000488594 RAD50Q92878 1312 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 PTPDC1A2A3K4 754 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 ZBBXA8MT70 800 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 NFIBO00712 420 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 ATP2A2P16615 1042 aaKnown RBP22.46■■□□□ 1.19
GGPS1-206ENST00000488594 RABGGTBP53611 331 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 TTBK2Q6IQ55 1244 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 ADAMTS19Q8TE59 1207 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 EVI5LQ96CN4 794 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 SCLYQ96I15 445 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 MTG1Q9BT17 334 aaPredicted RBP22.46■■□□□ 1.19
GGPS1-206ENST00000488594 HELLSQ9NRZ9 838 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 TCP11L1Q9NUJ3 509 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 TRMT13Q9NUP7 481 aaKnown RBP22.46■■□□□ 1.19
GGPS1-206ENST00000488594 ZBTB47Q9UFB7 747 aaPredicted RBP22.46■■□□□ 1.19
GGPS1-206ENST00000488594 PCDHB15Q9Y5E8 787 aa22.46■■□□□ 1.19
GGPS1-206ENST00000488594 MUC3AQ02505 3323 aa22.45■■□□□ 1.18
GGPS1-206ENST00000488594 NKRFO15226 690 aaKnown RBP eCLIP22.45■■□□□ 1.18
GGPS1-206ENST00000488594 KPNA6O60684 536 aa22.45■■□□□ 1.18
GGPS1-206ENST00000488594 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
GGPS1-206ENST00000488594 TOMM22Q9NS69 142 aa22.45■■□□□ 1.18
GGPS1-206ENST00000488594 MYL3P08590 195 aa22.44■■□□□ 1.18
GGPS1-206ENST00000488594 ACTN1P12814 892 aa22.44■■□□□ 1.18
GGPS1-206ENST00000488594 RFC2P35250 354 aa22.44■■□□□ 1.18
GGPS1-206ENST00000488594 RNF207Q6ZRF8 634 aa22.44■■□□□ 1.18
GGPS1-206ENST00000488594 TICAM2Q86XR7 235 aa22.44■■□□□ 1.18
GGPS1-206ENST00000488594 OR6J1Q8NGC5 347 aa22.44■■□□□ 1.18
GGPS1-206ENST00000488594 VWCEQ96DN2 955 aa22.44■■□□□ 1.18
GGPS1-206ENST00000488594 TMEM47Q9BQJ4 181 aa22.44■■□□□ 1.18
GGPS1-206ENST00000488594 CHD9Q3L8U1 2897 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 FRMPD2Q68DX3 1309 aaPredicted RBP22.43■■□□□ 1.18
GGPS1-206ENST00000488594 SALL3Q9BXA9 1300 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 CYP2C9P11712 490 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 PDE4DQ08499 809 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 PPP2R5BQ15173 497 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 NFRKBQ6P4R8 1299 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 DNERQ8NFT8 737 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 CLEC4DQ8WXI8 215 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 UHRF1Q96T88 793 aaPredicted RBP22.43■■□□□ 1.18
GGPS1-206ENST00000488594 GPCPD1Q9NPB8 672 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 MYO9BQ13459 2157 aa22.43■■□□□ 1.18
GGPS1-206ENST00000488594 WDR19Q8NEZ3 1342 aa22.42■■□□□ 1.18
GGPS1-206ENST00000488594 B4DLN1 442 aa22.42■■□□□ 1.18
GGPS1-206ENST00000488594 CALML3P27482 149 aa22.42■■□□□ 1.18
GGPS1-206ENST00000488594 MRPL12P52815 198 aaKnown RBP22.42■■□□□ 1.18
GGPS1-206ENST00000488594 TTLL4Q14679 1199 aa22.42■■□□□ 1.18
GGPS1-206ENST00000488594 TMEM67Q5HYA8 995 aa22.42■■□□□ 1.18
GGPS1-206ENST00000488594 RRP12Q5JTH9 1297 aaKnown RBP22.42■■□□□ 1.18
GGPS1-206ENST00000488594 SLC30A10Q6XR72 485 aa22.42■■□□□ 1.18
GGPS1-206ENST00000488594 SCFD2Q8WU76 684 aa22.42■■□□□ 1.18
GGPS1-206ENST00000488594 PITPNM1O00562 1244 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 FGAP02671 866 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 PDHBP11177 359 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 PCP11498 1178 aaKnown RBP22.41■■□□□ 1.18
GGPS1-206ENST00000488594 MYOGP15173 224 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 EDNRBP24530 442 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 PTPN11Q06124 597 aaPredicted RBP22.41■■□□□ 1.18
GGPS1-206ENST00000488594 AAK1Q2M2I8 961 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 FAM47CQ5HY64 1035 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 DEFB128Q7Z7B8 93 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 PHOSPHO2Q8TCD6 241 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 TTC14Q96N46 770 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 LCTP09848 1927 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 ZMYM6O95789 1325 aa22.41■■□□□ 1.18
GGPS1-206ENST00000488594 A6NJR5 290 aa22.4■■□□□ 1.18
GGPS1-206ENST00000488594 COL9A1P20849 921 aa22.4■■□□□ 1.18
GGPS1-206ENST00000488594 RPS6P62753 249 aaKnown RBP22.4■■□□□ 1.18
GGPS1-206ENST00000488594 ZNF543Q08ER8 600 aa22.4■■□□□ 1.18
GGPS1-206ENST00000488594 NBPF20Q3BBV1 942 aa22.4■■□□□ 1.18
GGPS1-206ENST00000488594 MCMDC2Q4G0Z9 681 aa22.4■■□□□ 1.18
GGPS1-206ENST00000488594 RETREG2Q8NC44 543 aa22.4■■□□□ 1.18
GGPS1-206ENST00000488594 SLC9A7Q96T83 725 aa22.4■■□□□ 1.18
GGPS1-206ENST00000488594 POU3F3P20264 500 aaPredicted RBP22.39■■□□□ 1.18
GGPS1-206ENST00000488594 MAF1Q9H063 256 aa22.39■■□□□ 1.18
GGPS1-206ENST00000488594 GTPBP6O43824 516 aaPredicted RBP22.38■■□□□ 1.17
GGPS1-206ENST00000488594 CA3P07451 260 aa22.38■■□□□ 1.17
GGPS1-206ENST00000488594 IQCF3P0C7M6 154 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms