RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 MPHOSPH6Q99547 160 aaKnown RBP26.46■■□□□ 1.83
PTPN4-211ENST00000488279 RPS6P62753 249 aaKnown RBP26.45■■□□□ 1.82
PTPN4-211ENST00000488279 CXCL17Q6UXB2 119 aa26.45■■□□□ 1.82
PTPN4-211ENST00000488279 SLC30A10Q6XR72 485 aa26.45■■□□□ 1.82
PTPN4-211ENST00000488279 UBAC1Q9BSL1 405 aa26.45■■□□□ 1.82
PTPN4-211ENST00000488279 CPVLQ9H3G5 476 aa26.45■■□□□ 1.82
PTPN4-211ENST00000488279 TBX21Q9UL17 535 aa26.45■■□□□ 1.82
PTPN4-211ENST00000488279 STXBP5LQ9Y2K9 1186 aa26.45■■□□□ 1.82
PTPN4-211ENST00000488279 TLR3O15455 904 aaKnown RBP26.44■■□□□ 1.82
PTPN4-211ENST00000488279 EPHB4P54760 987 aa26.44■■□□□ 1.82
PTPN4-211ENST00000488279 IRX6P78412 446 aaPredicted RBP26.44■■□□□ 1.82
PTPN4-211ENST00000488279 USH1GQ495M9 461 aa26.44■■□□□ 1.82
PTPN4-211ENST00000488279 ASPRV1Q53RT3 343 aa26.44■■□□□ 1.82
PTPN4-211ENST00000488279 RGS22Q8NE09 1264 aa26.44■■□□□ 1.82
PTPN4-211ENST00000488279 RUFY2Q8WXA3 655 aa26.44■■□□□ 1.82
PTPN4-211ENST00000488279 IL25Q9H293 177 aa26.44■■□□□ 1.82
PTPN4-211ENST00000488279 TNKSO95271 1327 aa26.43■■□□□ 1.82
PTPN4-211ENST00000488279 DUSP28Q4G0W2 176 aa26.43■■□□□ 1.82
PTPN4-211ENST00000488279 TMEM63BQ5T3F8 832 aa26.43■■□□□ 1.82
PTPN4-211ENST00000488279 SLC17A8Q8NDX2 589 aa26.43■■□□□ 1.82
PTPN4-211ENST00000488279 DNERQ8NFT8 737 aa26.43■■□□□ 1.82
PTPN4-211ENST00000488279 WDR11Q9BZH6 1224 aa26.43■■□□□ 1.82
PTPN4-211ENST00000488279 B4DLN1 442 aa26.42■■□□□ 1.82
PTPN4-211ENST00000488279 PARP1P09874 1014 aaKnown RBP26.42■■□□□ 1.82
PTPN4-211ENST00000488279 PTGS1P23219 599 aa26.42■■□□□ 1.82
PTPN4-211ENST00000488279 MRPL12P52815 198 aaKnown RBP26.42■■□□□ 1.82
PTPN4-211ENST00000488279 PDE4DQ08499 809 aa26.42■■□□□ 1.82
PTPN4-211ENST00000488279 CDC37Q16543 378 aaPredicted RBP26.42■■□□□ 1.82
PTPN4-211ENST00000488279 MFSD5Q6N075 450 aa26.42■■□□□ 1.82
PTPN4-211ENST00000488279 FAM126BQ8IXS8 530 aa26.42■■□□□ 1.82
PTPN4-211ENST00000488279 ADGRF4Q8IZF3 695 aa26.42■■□□□ 1.82
PTPN4-211ENST00000488279 RNPC3Q96LT9 517 aaKnown RBP26.42■■□□□ 1.82
PTPN4-211ENST00000488279 SEZ6LQ9BYH1 1024 aa26.42■■□□□ 1.82
PTPN4-211ENST00000488279 RAD50Q92878 1312 aa26.41■■□□□ 1.82
PTPN4-211ENST00000488279 SMAD3P84022 425 aaKnown RBP26.41■■□□□ 1.82
PTPN4-211ENST00000488279 ITGA7Q13683 1181 aa26.41■■□□□ 1.82
PTPN4-211ENST00000488279 IFIT1BQ5T764 474 aaKnown RBP26.41■■□□□ 1.82
PTPN4-211ENST00000488279 ZNF697Q5TEC3 545 aa26.41■■□□□ 1.82
PTPN4-211ENST00000488279 SLC43A3Q8NBI5 491 aa26.41■■□□□ 1.82
PTPN4-211ENST00000488279 MAF1Q9H063 256 aa26.41■■□□□ 1.82
PTPN4-211ENST00000488279 RBM47A0AV96 593 aaKnown RBP26.4■■□□□ 1.82
PTPN4-211ENST00000488279 TRDNQ13061 729 aa26.4■■□□□ 1.82
PTPN4-211ENST00000488279 DHX16O60231 1041 aaKnown RBP26.39■■□□□ 1.82
PTPN4-211ENST00000488279 CD4P01730 458 aa26.39■■□□□ 1.82
PTPN4-211ENST00000488279 CHMLP26374 656 aa26.39■■□□□ 1.82
PTPN4-211ENST00000488279 FAM161BQ96MY7 647 aa26.39■■□□□ 1.82
PTPN4-211ENST00000488279 VAT1LQ9HCJ6 419 aa26.39■■□□□ 1.82
PTPN4-211ENST00000488279 U3KPZ7 1027 aaPredicted RBP26.39■■□□□ 1.82
PTPN4-211ENST00000488279 ABCB11O95342 1321 aa26.39■■□□□ 1.81
PTPN4-211ENST00000488279 EDNRBP24530 442 aa26.38■■□□□ 1.81
PTPN4-211ENST00000488279 PPIGQ13427 754 aaKnown RBP eCLIP26.38■■□□□ 1.811e-6■■□□□ 13.7
PTPN4-211ENST00000488279 TMEM199Q8N511 208 aa26.38■■□□□ 1.81
PTPN4-211ENST00000488279 GRIN2DO15399 1336 aa26.38■■□□□ 1.81
PTPN4-211ENST00000488279 CPT1AP50416 773 aa26.37■■□□□ 1.81
PTPN4-211ENST00000488279 MCF2L2Q86YR7 1114 aa26.37■■□□□ 1.81
PTPN4-211ENST00000488279 SCFD2Q8WU76 684 aa26.37■■□□□ 1.81
PTPN4-211ENST00000488279 PPP1R12CQ9BZL4 782 aa26.37■■□□□ 1.81
PTPN4-211ENST00000488279 JMJD4Q9H9V9 463 aa26.37■■□□□ 1.81
PTPN4-211ENST00000488279 LAMA4Q16363 1823 aa26.37■■□□□ 1.81
PTPN4-211ENST00000488279 NKRFO15226 690 aaKnown RBP eCLIP26.36■■□□□ 1.81
PTPN4-211ENST00000488279 PTH1RQ03431 593 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 PPP2R5BQ15173 497 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 SEC23AQ15436 765 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 QRICH1Q2TAL8 776 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 BRDTQ58F21 947 aaPredicted RBP26.36■■□□□ 1.81
PTPN4-211ENST00000488279 CYB5R4Q7L1T6 521 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 FBXO11Q86XK2 927 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 OR6J1Q8NGC5 347 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 TBC1D5Q92609 795 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 GUCD1Q96NT3 240 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 SEMA6BQ9H3T3 888 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 POLR3EQ9NVU0 708 aa26.36■■□□□ 1.81
PTPN4-211ENST00000488279 MRPL11Q9Y3B7 192 aaKnown RBP26.36■■□□□ 1.81
PTPN4-211ENST00000488279 CYP21A2P08686 494 aa26.35■■□□□ 1.81
PTPN4-211ENST00000488279 PSMC6P62333 389 aa26.35■■□□□ 1.81
PTPN4-211ENST00000488279 GPHNQ9NQX3 736 aaPredicted RBP26.35■■□□□ 1.81
PTPN4-211ENST00000488279 CSF2RAP15509 400 aa26.34■■□□□ 1.81
PTPN4-211ENST00000488279 STAG2Q8N3U4 1231 aa26.34■■□□□ 1.81
PTPN4-211ENST00000488279 SYTL5Q8TDW5 730 aaPredicted RBP26.34■■□□□ 1.81
PTPN4-211ENST00000488279 NSUN6Q8TEA1 469 aaKnown RBP26.34■■□□□ 1.81
PTPN4-211ENST00000488279 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.34■■□□□ 1.81
PTPN4-211ENST00000488279 TRPV6Q9H1D0 765 aa26.34■■□□□ 1.81
PTPN4-211ENST00000488279 HIPK3Q9H422 1215 aa26.34■■□□□ 1.81
PTPN4-211ENST00000488279 LCTP09848 1927 aa26.33■■□□□ 1.81
PTPN4-211ENST00000488279 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.33■■□□□ 1.81
PTPN4-211ENST00000488279 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.33■■□□□ 1.81
PTPN4-211ENST00000488279 KLRF2D3W0D1 207 aa26.33■■□□□ 1.81
PTPN4-211ENST00000488279 MYL3P08590 195 aa26.33■■□□□ 1.81
PTPN4-211ENST00000488279 TXNP10599 105 aaKnown RBP26.33■■□□□ 1.81
PTPN4-211ENST00000488279 CYP2C18P33260 490 aa26.33■■□□□ 1.81
PTPN4-211ENST00000488279 TTLL4Q14679 1199 aa26.33■■□□□ 1.81
PTPN4-211ENST00000488279 C16orf59Q7L2K0 433 aa26.33■■□□□ 1.81
PTPN4-211ENST00000488279 TAAR1Q96RJ0 339 aa26.33■■□□□ 1.81
PTPN4-211ENST00000488279 LRRC37A2A6NM11 1700 aa26.33■■□□□ 1.81
PTPN4-211ENST00000488279 ERICH2A1L162 156 aa26.32■■□□□ 1.8
PTPN4-211ENST00000488279 SGSM2O43147 1006 aa26.32■■□□□ 1.8
PTPN4-211ENST00000488279 B4GALT4O60513 344 aa26.32■■□□□ 1.8
PTPN4-211ENST00000488279 PURAQ00577 322 aaKnown RBP26.32■■□□□ 1.8
PTPN4-211ENST00000488279 TMEM240Q5SV17 173 aa26.32■■□□□ 1.8
PTPN4-211ENST00000488279 RALYLQ86SE5 291 aaKnown RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms