RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 CDK8P49336 464 aa9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 HMGCS2P54868 508 aa9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 EML3Q32P44 896 aa9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 CERKLQ49MI3 558 aaPredicted RBP9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 TMED8Q6PL24 325 aaPredicted RBP9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 CENPQQ7L2Z9 268 aaPredicted RBP9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 PRRT2Q7Z6L0 340 aaPredicted RBP9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
NECTIN3-209ENST00000488016 USP17L5A8MUK1 530 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 PIK3CDO00329 1044 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 PDHXO00330 501 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 CETPP11597 493 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 HAND2P61296 217 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 TAF1CQ15572 869 aaPredicted RBP9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 ABCB5Q2M3G0 1257 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 KIAA1755Q5JYT7 1200 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 C16orf86Q6ZW13 317 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 ZNF280CQ8ND82 737 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 ZNF296Q8WUU4 475 aaPredicted RBP9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 NAPBQ9H115 298 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 HELLSQ9NRZ9 838 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 SAGE1Q9NXZ1 904 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 ARPP21Q9UBL0 812 aaPredicted RBP9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 CCDC171Q6TFL3 1326 aa9.28□□□□□ -0.92
NECTIN3-209ENST00000488016 LOC285556D6RIA3 1793 aa9.27□□□□□ -0.92
NECTIN3-209ENST00000488016 BRCA2P51587 3418 aa9.27□□□□□ -0.92
NECTIN3-209ENST00000488016 A0A1W2PRG0 241 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 ASNSP08243 561 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 HSPD1P10809 573 aaKnown RBP9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 RASA1P20936 1047 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 PPARAQ07869 468 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 LBRQ14739 615 aaKnown RBP9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 LRRFIP1Q32MZ4 808 aaKnown RBP9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 MCMDC2Q4G0Z9 681 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 FAM47AQ5JRC9 791 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 CD99L2Q8TCZ2 262 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 CHMP4CQ96CF2 233 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 ARHGAP39Q9C0H5 1083 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 ALG2Q9H553 416 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 DIAPH3Q9NSV4 1193 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 CPA4Q9UI42 421 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 SZT2Q5T011 3432 aa9.27□□□□□ -0.93
NECTIN3-209ENST00000488016 ROBO3Q96MS0 1386 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 CXCL11O14625 94 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 LZTS3O60299 673 aaPredicted RBP9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 FGAP02671 866 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 GNAT2P19087 354 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 MX2P20592 715 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 CTGFP29279 349 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 PLA2G4AP47712 749 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 FXR1P51114 621 aaKnown RBP eCLIP9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 MARSP56192 900 aaKnown RBP9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 BACE1P56817 501 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 ATP2B2Q01814 1243 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 SBK1Q52WX2 424 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 EFHC2Q5JST6 749 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 LYPD4Q6UWN0 246 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 RASGRP2Q7LDG7 609 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 ANKRD23Q86SG2 305 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 SIAH1Q8IUQ4 282 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 TBC1D10CQ8IV04 446 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 NOD1Q9Y239 953 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 GREB1LQ9C091 1923 aaPredicted RBP9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 MKI67P46013 3256 aaKnown RBP9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 ADGRA2Q96PE1 1338 aa9.26□□□□□ -0.93
NECTIN3-209ENST00000488016 NMT2O60551 498 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 CHMLP26374 656 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 MSX1P28360 303 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 INHBEP58166 350 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 PTH1RQ03431 593 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 KCNMA1Q12791 1236 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 TMEM132AQ24JP5 1023 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 GIMAP6Q6P9H5 292 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 AMOTL1Q8IY63 956 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 SPICE1Q8N0Z3 855 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 FEZ1Q99689 392 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 WDR18Q9BV38 432 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 NIFKQ9BYG3 293 aaKnown RBP9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 RUBCNLQ9H714 662 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 AS3MTQ9HBK9 375 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 CABP5Q9NP86 173 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 ENAMQ9NRM1 1142 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 SWAP70Q9UH65 585 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 SERTAD1Q9UHV2 236 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 TAF6LQ9Y6J9 622 aa9.25□□□□□ -0.93
NECTIN3-209ENST00000488016 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 DLL1O00548 723 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 FKTNO75072 461 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 ARHGEF15O94989 841 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 CELA2BP08218 269 aaPredicted RBP9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 EEF2P13639 858 aaKnown RBP9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 SMTNP53814 917 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 ICA1Q05084 483 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 RRP12Q5JTH9 1297 aaKnown RBP9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 OTUD7BQ6GQQ9 843 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 NACAP1Q9BZK3 213 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 MKNK2Q9HBH9 465 aa9.24□□□□□ -0.93
NECTIN3-209ENST00000488016 ZFYVE28Q9HCC9 887 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms