RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	IGDCC4	Q8TDY8	1250 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	NUP133	Q8WUM0	1156 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	RANBP17	Q9H2T7	1088 aa	Known RBP	11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	HOMER2	Q9NSB8	354 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	CCPG1	Q9ULG6	757 aa		11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	KIAA0100	Q14667	2235 aa	Known RBP	11.1	□□□□□ -0.63
PTBP3-208	ENST00000487997	FRMPD3	Q5JV73	1810 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	ICAM1	P05362	532 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	CCL5	P13501	91 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	PSMA5	P28066	241 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	ANTXR2	P58335	489 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	DHX32	Q7L7V1	743 aa	Known RBP	11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	PACS2	Q86VP3	889 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	CTCFL	Q8NI51	663 aa	Predicted RBP	11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	TRIB2	Q92519	343 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	USP6NL	Q92738	828 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	AGBL1	Q96MI9	1066 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	TRERF1	Q96PN7	1200 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	UBA5	Q9GZZ9	404 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	RNF208	Q9H0X6	261 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	ACAD9	Q9H845	621 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	VAT1L	Q9HCJ6	419 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	HMX1	Q9NP08	348 aa	Predicted RBP	11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	RNF146	Q9NTX7	359 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	RIPK3	Q9Y572	518 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	WDR19	Q8NEZ3	1342 aa		11.09	□□□□□ -0.63
PTBP3-208	ENST00000487997	KLRF2	D3W0D1	207 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	SH2B2	O14492	632 aa	Predicted RBP	11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	DDAH1	O94760	285 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	HOXC6	P09630	235 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	CALM1	P0DP23	149 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	CALM2	P0DP24	149 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	CALM3	P0DP25	149 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	KIF5B	P33176	963 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	MLLT3	P42568	568 aa	Predicted RBP	11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	LIFR	P42702	1097 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	GRM4	Q14833	912 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	CCL14	Q16627	93 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	BLOC1S2	Q6QNY1	142 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	ADGRF4	Q8IZF3	695 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	ZNF654	Q8IZM8	581 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	NPLOC4	Q8TAT6	608 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	JAKMIP1	Q96N16	626 aa	Known RBP	11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	LY9	Q9HBG7	655 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	SNX14	Q9Y5W7	946 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	SLC12A7	Q9Y666	1083 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	PFAS	O15067	1338 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	ZNF536	O15090	1300 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	RPTOR	Q8N122	1335 aa		11.08	□□□□□ -0.64
PTBP3-208	ENST00000487997	CENPF	P49454	3210 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	PALM3	A6NDB9	673 aa	Predicted RBP	11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	SMAP	O00193	183 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	COBL	O75128	1261 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	PGK2	P07205	417 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	TRAF1	Q13077	416 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	MTFR1	Q15390	333 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	CDC37	Q16543	378 aa	Predicted RBP	11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	ADCK5	Q3MIX3	580 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	STAG2	Q8N3U4	1231 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	KCNB2	Q92953	911 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	MAP3K14	Q99558	947 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	USP26	Q9BXU7	913 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	LRRC2	Q9BYS8	371 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	UNC93B1	Q9H1C4	597 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	CPVL	Q9H3G5	476 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	SENP2	Q9HC62	589 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	MAD2L2	Q9UI95	211 aa		11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	DIS3	Q9Y2L1	958 aa	Known RBP	11.07	□□□□□ -0.64
PTBP3-208	ENST00000487997	LCT	P09848	1927 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	GJB1	P08034	283 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	CAPN2	P17655	700 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	CAST	P20810	708 aa	Known RBP	11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	CNGA1	P29973	690 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	GNAQ	P50148	359 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	TROAP	Q12815	778 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	USH1G	Q495M9	461 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	OLFML2B	Q68BL8	750 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	NSMF	Q6X4W1	530 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	FBXO11	Q86XK2	927 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	MAML3	Q96JK9	1138 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	LZTS2	Q9BRK4	669 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.06	□□□□□ -0.64	3e-9	■■■■□ 20.4
PTBP3-208	ENST00000487997	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	HTT	P42858	3142 aa		11.06	□□□□□ -0.64
PTBP3-208	ENST00000487997	PTPDC1	A2A3K4	754 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	TFRC	P02786	760 aa	Known RBP	11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	CYP2C19	P33261	490 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	EXOSC10	Q01780	885 aa	Known RBP	11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	CACNB2	Q08289	660 aa	Predicted RBP	11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	TRIM32	Q13049	653 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	QRICH1	Q2TAL8	776 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	ZNF792	Q3KQV3	632 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	MUM1L1	Q5H9M0	696 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	SGMS1	Q86VZ5	419 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	MICU3	Q86XE3	530 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	HOMER1	Q86YM7	354 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	TCEANC2	Q96MN5	208 aa		11.05	□□□□□ -0.64
PTBP3-208	ENST00000487997	DEFB118	Q96PH6	123 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms