RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 RAD17O75943 681 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 TIAF1O95411 115 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 TGFB1P01137 390 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 CYP11A1P05108 521 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 P4HBP07237 508 aaKnown RBP6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 HOXB7P09629 217 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 HCLS1P14317 486 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 GRIK1P39086 918 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 GRM1Q13255 1194 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 PROSER3Q2NL68 480 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 COPS6Q7L5N1 327 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 KRT26Q7Z3Y9 468 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 C12orf50Q8NA57 414 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 ISCA1Q9BUE6 129 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 GBA2Q9HCG7 927 aaPredicted RBP6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 CYP4F12Q9HCS2 524 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 PPP4R2Q9NY27 417 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 PODXL2Q9NZ53 605 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 TSPYL4Q9UJ04 414 aa6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 DDX60Q8IY21 1712 aaKnown RBP6.64□□□□□ -1.35
R3HDM1-218ENST00000487294 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 SHTN1A0MZ66 631 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 PSMD14O00487 310 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 CHL1O00533 1208 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 BMP3P12645 472 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 DRD2P14416 443 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 GP2P55259 537 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 ZNF280AP59817 542 aaPredicted RBP6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 FKBP1BP68106 108 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 USP48Q86UV5 1035 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 ZDHHC13Q8IUH4 622 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 FAM20CQ8IXL6 584 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 C2orf69Q8N8R5 385 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 RTL9Q8NET4 1388 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 PLBD2Q8NHP8 589 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 FBF1Q8TES7 1133 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 XAGE3Q8WTP9 111 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 RNF186Q9NXI6 227 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 POLLQ9UGP5 575 aa6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 TRMT112Q9UI30 125 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 OAS3Q9Y6K5 1087 aaKnown RBP6.63□□□□□ -1.35
R3HDM1-218ENST00000487294 POLR2AP24928 1970 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 PITPNM2Q9BZ72 1349 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 MAPK8IP3Q9UPT6 1336 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 MED26O95402 600 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 SPINK2P20155 84 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 LMOD3Q0VAK6 560 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 NFIAQ12857 509 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 CNGB1Q14028 1251 aaPredicted RBP6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 PKN2Q16513 984 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 ALG1LQ6GMV1 187 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 TRIM42Q8IWZ5 723 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 C3orf58Q8NDZ4 430 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 AGBL3Q8NEM8 1001 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 DCPSQ96C86 337 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 GMLQ99445 158 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 EYA3Q99504 573 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 CORO1BQ9BR76 489 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 OSBPL7Q9BZF2 842 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 TAF1P21675 1872 aa6.62□□□□□ -1.35
R3HDM1-218ENST00000487294 SCN9AQ15858 1988 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 AKAP11Q9UKA4 1901 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 HMX2A2RU54 273 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 ECE2O60344 883 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 ANXA1P04083 346 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 XRCC5P13010 732 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 HSP90B1P14625 803 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 EIF2S2P20042 333 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 TMPOP42166 694 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 MMP14P50281 582 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 RIPK4P57078 832 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 RPS8P62241 208 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 GPSM2P81274 684 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 SOX4Q06945 474 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 TBC1D10BQ4KMP7 808 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 CTU1Q7Z7A3 348 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 CLEC10AQ8IUN9 316 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 TBC1D16Q8TBP0 767 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 CELF1Q92879 486 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 DBNDD2Q9BQY9 259 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 KCNF1Q9H3M0 494 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 C7orf69Q9H7B7 122 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 DBNDD1Q9H9R9 158 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 ZFYVE1Q9HBF4 777 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 DBF4Q9UBU7 674 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 AKAP2Q9Y2D5 859 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 PSME4Q14997 1843 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 PAPPA2Q9BXP8 1791 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 COL4A1P02462 1669 aa6.61□□□□□ -1.35
R3HDM1-218ENST00000487294 ANKRD33BA6NCL7 494 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 ADM5C9JUS6 153 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 GAS2O43903 313 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 TAL1P17542 331 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 TM4SF4P48230 202 aa6.6□□□□□ -1.35
R3HDM1-218ENST00000487294 ATP2B2Q01814 1243 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms