RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 hCG_1984214I3L0E3 225 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 GTF2IP78347 998 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 GRB10Q13322 594 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 MEA1Q16626 185 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 COBLL1Q53SF7 1204 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 ZNF713Q8N859 430 aaPredicted RBP13.79□□□□□ -0.2
PTCD2-204ENST00000486995 KIAA0895Q8NCT3 520 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 HPS3Q969F9 1004 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
PTCD2-204ENST00000486995 BLOC1S4Q9NUP1 217 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 AGPAT5Q9NUQ2 364 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 IGKV6D-41A0A0C4DH26 115 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 CCDC151A5D8V7 595 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 NKRFO15226 690 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTCD2-204ENST00000486995 SNHG28P0DPA3 235 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 AKR1B1P15121 316 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 KLK7P49862 253 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 AMPD2Q01433 879 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 TBC1D8BQ0IIM8 1120 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 PICALMQ13492 652 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 MIIPQ5JXC2 388 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 LRRC47Q8N1G4 583 aaKnown RBP13.79□□□□□ -0.2
PTCD2-204ENST00000486995 CALML4Q96GE6 196 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 CNOT6LQ96LI5 555 aaKnown RBP13.79□□□□□ -0.2
PTCD2-204ENST00000486995 FUT8Q9BYC5 575 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 MYH1P12882 1939 aa13.79□□□□□ -0.2
PTCD2-204ENST00000486995 SLC37A4O43826 429 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 PPP1R2P41236 205 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTCD2-204ENST00000486995 HERVK_113P62684 666 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 BRD3Q15059 726 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 CALCRLQ16602 461 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 CNNM4Q6P4Q7 775 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 CRAMP1Q96RY5 1269 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 SEMA6BQ9H3T3 888 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 GUCA1BQ9UMX6 200 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 DDR1Q08345 913 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 WHAMMP3Q1A5X7 153 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 TSR1Q2NL82 804 aaKnown RBP13.78□□□□□ -0.2
PTCD2-204ENST00000486995 ASPRV1Q53RT3 343 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 SV2BQ7L1I2 683 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
PTCD2-204ENST00000486995 RETREG2Q8NC44 543 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 MSANTD4Q8NCY6 345 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 NUP58Q9BVL2 599 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 HAUS4Q9H6D7 363 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 DDX4Q9NQI0 724 aaKnown RBP13.78□□□□□ -0.2
PTCD2-204ENST00000486995 LRWD1Q9UFC0 647 aa13.78□□□□□ -0.2
PTCD2-204ENST00000486995 KLRG2A4D1S0 409 aaPredicted RBP13.77□□□□□ -0.2
PTCD2-204ENST00000486995 MYMKA6NI61 221 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 TDP2O95551 362 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 ADCY7P51828 1080 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 EIF6P56537 245 aaKnown RBP13.77□□□□□ -0.2
PTCD2-204ENST00000486995 CENPPQ6IPU0 288 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 DPP8Q6V1X1 898 aaPredicted RBP13.77□□□□□ -0.2
PTCD2-204ENST00000486995 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 FAM114A1Q8IWE2 563 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 PNKPQ96T60 521 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 SLC39A2Q9NP94 309 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 RAB21Q9UL25 225 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 TFR2Q9UP52 801 aa13.77□□□□□ -0.2
PTCD2-204ENST00000486995 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
PTCD2-204ENST00000486995 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
PTCD2-204ENST00000486995 TUBB4BP68371 445 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 FAM193AP78312 1265 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 MCM6Q14566 821 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 LONRF2Q1L5Z9 754 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 NOC4LQ9BVI4 516 aaKnown RBP13.77□□□□□ -0.21
PTCD2-204ENST00000486995 GPCPD1Q9NPB8 672 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 MYO6Q9UM54 1294 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 PSMD14O00487 310 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 RIMBP2O15034 1052 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 ZBED6P86452 979 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 PDIA5Q14554 519 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 ZNF662Q6ZS27 426 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 CERS5Q8N5B7 392 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 HNRNPLLQ8WVV9 542 aaKnown RBP13.77□□□□□ -0.21
PTCD2-204ENST00000486995 ERGIC2Q96RQ1 377 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 NUDT12Q9BQG2 462 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 JMJD4Q9H9V9 463 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 STK17AQ9UEE5 414 aa13.77□□□□□ -0.21
PTCD2-204ENST00000486995 CTAGE15A4D2H0 777 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 F8W031 263 aaPredicted RBP13.76□□□□□ -0.21
PTCD2-204ENST00000486995 POLRMTO00411 1230 aaKnown RBP13.76□□□□□ -0.21
PTCD2-204ENST00000486995 ONECUT3O60422 494 aaPredicted RBP13.76□□□□□ -0.21
PTCD2-204ENST00000486995 PPP1R11O60927 126 aaPredicted RBP13.76□□□□□ -0.21
PTCD2-204ENST00000486995 CTAGE8P0CG41 777 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 UNC13DQ70J99 1090 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 CTAGE6Q86UF2 777 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 CTAGE4Q8IX94 777 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 LARP4BQ92615 738 aaKnown RBP13.76□□□□□ -0.21
PTCD2-204ENST00000486995 PVALEFA0A1B0GWK0 134 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 POTEMA6NI47 508 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 POTEB2H3BUK9 544 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 MAP2K7O14733 419 aa13.76□□□□□ -0.21
PTCD2-204ENST00000486995 TTLL1O95922 423 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms