RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 OTUD7AQ8TE49 926 aaPredicted RBP23.68■■□□□ 1.38
PHF1-208ENST00000486845 INCENPQ9NQS7 918 aa23.68■■□□□ 1.38
PHF1-208ENST00000486845 PCDHA11Q9Y5I1 949 aa23.68■■□□□ 1.38
PHF1-208ENST00000486845 ZBBXA8MT70 800 aa23.67■■□□□ 1.38
PHF1-208ENST00000486845 ORC4O43929 436 aa23.67■■□□□ 1.38
PHF1-208ENST00000486845 PFKMP08237 780 aa23.67■■□□□ 1.38
PHF1-208ENST00000486845 MX1P20591 662 aa23.67■■□□□ 1.38
PHF1-208ENST00000486845 ALDH5A1P51649 535 aaPredicted RBP23.67■■□□□ 1.38
PHF1-208ENST00000486845 BAATQ14032 418 aaPredicted RBP23.67■■□□□ 1.38
PHF1-208ENST00000486845 IL27Q8NEV9 243 aa23.67■■□□□ 1.38
PHF1-208ENST00000486845 PURBQ96QR8 312 aaKnown RBP23.67■■□□□ 1.38
PHF1-208ENST00000486845 WDR11Q9BZH6 1224 aa23.67■■□□□ 1.38
PHF1-208ENST00000486845 MUC3AQ02505 3323 aa23.66■■□□□ 1.38
PHF1-208ENST00000486845 CPT1AP50416 773 aa23.66■■□□□ 1.38
PHF1-208ENST00000486845 SYDE2Q5VT97 1194 aa23.66■■□□□ 1.38
PHF1-208ENST00000486845 PPP2R2DQ66LE6 453 aa23.66■■□□□ 1.38
PHF1-208ENST00000486845 BTNL9Q6UXG8 535 aa23.66■■□□□ 1.38
PHF1-208ENST00000486845 ADAMTS19Q8TE59 1207 aa23.66■■□□□ 1.38
PHF1-208ENST00000486845 SCLYQ96I15 445 aa23.66■■□□□ 1.38
PHF1-208ENST00000486845 TSPYL2Q9H2G4 693 aaPredicted RBP23.66■■□□□ 1.38
PHF1-208ENST00000486845 TNKSO95271 1327 aa23.65■■□□□ 1.38
PHF1-208ENST00000486845 RABGGTBP53611 331 aa23.65■■□□□ 1.38
PHF1-208ENST00000486845 NCOR1O75376 2440 aa23.65■■□□□ 1.38
PHF1-208ENST00000486845 CHD7Q9P2D1 2997 aa23.65■■□□□ 1.38
PHF1-208ENST00000486845 RBM47A0AV96 593 aaKnown RBP23.64■■□□□ 1.37
PHF1-208ENST00000486845 PTPDC1A2A3K4 754 aa23.64■■□□□ 1.37
PHF1-208ENST00000486845 NFIBO00712 420 aa23.64■■□□□ 1.37
PHF1-208ENST00000486845 TOP1P11387 765 aaKnown RBP23.64■■□□□ 1.37
PHF1-208ENST00000486845 ATP2A2P16615 1042 aaKnown RBP23.64■■□□□ 1.37
PHF1-208ENST00000486845 SLC16A2P36021 539 aa23.64■■□□□ 1.37
PHF1-208ENST00000486845 PURAQ00577 322 aaKnown RBP23.64■■□□□ 1.37
PHF1-208ENST00000486845 BRDTQ58F21 947 aaPredicted RBP23.64■■□□□ 1.37
PHF1-208ENST00000486845 TTBK2Q6IQ55 1244 aa23.64■■□□□ 1.37
PHF1-208ENST00000486845 MTG1Q9BT17 334 aaPredicted RBP23.64■■□□□ 1.37
PHF1-208ENST00000486845 GPHNQ9NQX3 736 aaPredicted RBP23.64■■□□□ 1.37
PHF1-208ENST00000486845 TRMT13Q9NUP7 481 aaKnown RBP23.64■■□□□ 1.37
PHF1-208ENST00000486845 PNMA2Q9UL42 364 aa23.64■■□□□ 1.37
PHF1-208ENST00000486845 RAD50Q92878 1312 aa23.63■■□□□ 1.37
PHF1-208ENST00000486845 MYL3P08590 195 aa23.63■■□□□ 1.37
PHF1-208ENST00000486845 FGRP09769 529 aa23.63■■□□□ 1.37
PHF1-208ENST00000486845 CYP2C9P11712 490 aa23.63■■□□□ 1.37
PHF1-208ENST00000486845 ALX1Q15699 326 aa23.63■■□□□ 1.37
PHF1-208ENST00000486845 OR6J1Q8NGC5 347 aa23.63■■□□□ 1.37
PHF1-208ENST00000486845 VWCEQ96DN2 955 aa23.63■■□□□ 1.37
PHF1-208ENST00000486845 UHRF1Q96T88 793 aaPredicted RBP23.63■■□□□ 1.37
PHF1-208ENST00000486845 MPHOSPH6Q99547 160 aaKnown RBP23.63■■□□□ 1.37
PHF1-208ENST00000486845 TOMM22Q9NS69 142 aa23.63■■□□□ 1.37
PHF1-208ENST00000486845 MYOGP15173 224 aa23.62■■□□□ 1.37
PHF1-208ENST00000486845 COL9A1P20849 921 aa23.62■■□□□ 1.37
PHF1-208ENST00000486845 VPS53Q5VIR6 699 aa23.62■■□□□ 1.37
PHF1-208ENST00000486845 GPCPD1Q9NPB8 672 aa23.62■■□□□ 1.37
PHF1-208ENST00000486845 PCDHB15Q9Y5E8 787 aa23.62■■□□□ 1.37
PHF1-208ENST00000486845 FRMPD2Q68DX3 1309 aaPredicted RBP23.61■■□□□ 1.37
PHF1-208ENST00000486845 NKRFO15226 690 aaKnown RBP eCLIP23.61■■□□□ 1.37
PHF1-208ENST00000486845 ACTN1P12814 892 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 CALML3P27482 149 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 RFC2P35250 354 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 PDE4DQ08499 809 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 TTLL4Q14679 1199 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 PPP2R5BQ15173 497 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 SLC30A10Q6XR72 485 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 EVI5LQ96CN4 794 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 TMEM47Q9BQJ4 181 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 HELLSQ9NRZ9 838 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 TCP11L1Q9NUJ3 509 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 ZBTB47Q9UFB7 747 aaPredicted RBP23.61■■□□□ 1.37
PHF1-208ENST00000486845 SCN10AQ9Y5Y9 1956 aa23.61■■□□□ 1.37
PHF1-208ENST00000486845 SALL3Q9BXA9 1300 aa23.6■■□□□ 1.37
PHF1-208ENST00000486845 KPNA6O60684 536 aa23.6■■□□□ 1.37
PHF1-208ENST00000486845 FAM47CQ5HY64 1035 aa23.6■■□□□ 1.37
PHF1-208ENST00000486845 TMEM67Q5HYA8 995 aa23.6■■□□□ 1.37
PHF1-208ENST00000486845 RRP12Q5JTH9 1297 aaKnown RBP23.6■■□□□ 1.37
PHF1-208ENST00000486845 RNF207Q6ZRF8 634 aa23.6■■□□□ 1.37
PHF1-208ENST00000486845 DEFB128Q7Z7B8 93 aa23.6■■□□□ 1.37
PHF1-208ENST00000486845 MICALL1Q8N3F8 863 aa23.6■■□□□ 1.37
PHF1-208ENST00000486845 CLEC4DQ8WXI8 215 aa23.6■■□□□ 1.37
PHF1-208ENST00000486845 BDP1A6H8Y1 2624 aa23.59■■□□□ 1.37
PHF1-208ENST00000486845 NBPF20Q3BBV1 942 aa23.59■■□□□ 1.37
PHF1-208ENST00000486845 NFRKBQ6P4R8 1299 aa23.59■■□□□ 1.37
PHF1-208ENST00000486845 SCFD2Q8WU76 684 aa23.59■■□□□ 1.37
PHF1-208ENST00000486845 SCN5AQ14524 2016 aa23.59■■□□□ 1.37
PHF1-208ENST00000486845 WDR19Q8NEZ3 1342 aa23.59■■□□□ 1.37
PHF1-208ENST00000486845 B4DLN1 442 aa23.58■■□□□ 1.37
PHF1-208ENST00000486845 PITPNM1O00562 1244 aa23.58■■□□□ 1.37
PHF1-208ENST00000486845 PDHBP11177 359 aa23.58■■□□□ 1.37
PHF1-208ENST00000486845 MRPL12P52815 198 aaKnown RBP23.58■■□□□ 1.37
PHF1-208ENST00000486845 PTPN11Q06124 597 aaPredicted RBP23.58■■□□□ 1.37
PHF1-208ENST00000486845 RETREG2Q8NC44 543 aa23.58■■□□□ 1.37
PHF1-208ENST00000486845 DNERQ8NFT8 737 aa23.58■■□□□ 1.37
PHF1-208ENST00000486845 SLC9A7Q96T83 725 aa23.58■■□□□ 1.37
PHF1-208ENST00000486845 A6NJR5 290 aa23.57■■□□□ 1.36
PHF1-208ENST00000486845 FGAP02671 866 aa23.57■■□□□ 1.36
PHF1-208ENST00000486845 CA3P07451 260 aa23.57■■□□□ 1.36
PHF1-208ENST00000486845 EDNRBP24530 442 aa23.57■■□□□ 1.36
PHF1-208ENST00000486845 RPS6P62753 249 aaKnown RBP23.57■■□□□ 1.36
PHF1-208ENST00000486845 AAK1Q2M2I8 961 aa23.57■■□□□ 1.36
PHF1-208ENST00000486845 TANC1Q9C0D5 1861 aa23.57■■□□□ 1.36
PHF1-208ENST00000486845 ZMYM6O95789 1325 aa23.57■■□□□ 1.36
PHF1-208ENST00000486845 GTPBP6O43824 516 aaPredicted RBP23.56■■□□□ 1.36
PHF1-208ENST00000486845 ZNF543Q08ER8 600 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms