RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-204ENST00000486446 ADD2P35612 726 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 HMGCS2P54868 508 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 GDF10P55107 478 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 LACTBP83111 547 aaPredicted RBP8.45□□□□□ -1.06
PUDP-204ENST00000486446 CAP1Q01518 475 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 ZSCAN25Q6NSZ9 544 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 SMCR8Q8TEV9 937 aaPredicted RBP8.45□□□□□ -1.06
PUDP-204ENST00000486446 SDR42E1Q8WUS8 393 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 ARHGAP39Q9C0H5 1083 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 ALDH8A1Q9H2A2 487 aaPredicted RBP8.45□□□□□ -1.06
PUDP-204ENST00000486446 DNAJC18Q9H819 358 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 TMOD4Q9NZQ9 345 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 SERPINB13Q9UIV8 391 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 ZBTB21Q9ULJ3 1066 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 AGTPBP1Q9UPW5 1226 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 SLC45A1Q9Y2W3 748 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 RAD50Q92878 1312 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 ADGRA2Q96PE1 1338 aa8.45□□□□□ -1.06
PUDP-204ENST00000486446 PTPRFP10586 1907 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 LOC285556D6RIA3 1793 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 TMEM229AB2RXF0 380 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 HSP90AA1P07900 732 aaKnown RBP8.44□□□□□ -1.06
PUDP-204ENST00000486446 PSMC4P43686 418 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 NEK4P51957 841 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 ZNF445P59923 1031 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 JAG1P78504 1218 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 PDE4CQ08493 712 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 PABPC4Q13310 644 aaKnown RBP eCLIP8.44□□□□□ -1.06
PUDP-204ENST00000486446 SHROOM1Q2M3G4 852 aaPredicted RBP8.44□□□□□ -1.06
PUDP-204ENST00000486446 TREML2Q5T2D2 321 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 TSHZ3Q63HK5 1081 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 METTL16Q86W50 562 aaKnown RBP8.44□□□□□ -1.06
PUDP-204ENST00000486446 DEPDC4Q8N2C3 294 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 GPR161Q8N6U8 529 aaKnown RBP8.44□□□□□ -1.06
PUDP-204ENST00000486446 MAP4K1Q92918 833 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 ZSCAN10Q96SZ4 725 aaPredicted RBP8.44□□□□□ -1.06
PUDP-204ENST00000486446 FEZ1Q99689 392 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 WDR18Q9BV38 432 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 LSG1Q9H089 658 aaKnown RBP8.44□□□□□ -1.06
PUDP-204ENST00000486446 EHD4Q9H223 541 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 GRPEL1Q9HAV7 217 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 GINM1Q9NU53 330 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 MCM9Q9NXL9 1143 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 DYRK1BQ9Y463 629 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 PTCH2Q9Y6C5 1203 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 COL6A3P12111 3177 aa8.44□□□□□ -1.06
PUDP-204ENST00000486446 DDX60LQ5H9U9 1706 aaKnown RBP8.43□□□□□ -1.06
PUDP-204ENST00000486446 MYH7P12883 1935 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 USP17L10C9JJH3 530 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 H0YGN5 161 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 PRKAB2O43741 272 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 GH2P01242 217 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 CHGBP05060 677 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 CYP2D6P10635 497 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 BCRP11274 1271 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 EN2P19622 333 aaPredicted RBP8.43□□□□□ -1.06
PUDP-204ENST00000486446 HOXD10P28358 340 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 PLCD1P51178 756 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 PRMT2P55345 433 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 FCGRTP55899 365 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 NECTIN1Q15223 517 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 UBE3CQ15386 1083 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 ABCB5Q2M3G0 1257 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 CERKLQ49MI3 558 aaPredicted RBP8.43□□□□□ -1.06
PUDP-204ENST00000486446 SLC9C1Q4G0N8 1177 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 TATDN1Q6P1N9 297 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 USP17L2Q6R6M4 530 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 TAS1R3Q7RTX0 852 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 AMOTL1Q8IY63 956 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 DCP1AQ9NPI6 582 aaPredicted RBP8.43□□□□□ -1.06
PUDP-204ENST00000486446 ANO2Q9NQ90 1003 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 SLC4A4Q9Y6R1 1079 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 MYPNQ86TC9 1320 aa8.43□□□□□ -1.06
PUDP-204ENST00000486446 C19orf81C9J6K1 198 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 MPHOSPH10O00566 681 aaKnown RBP8.42□□□□□ -1.06
PUDP-204ENST00000486446 CTGFP29279 349 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 SHMT1P34896 483 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 BACE1P56817 501 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 IRX3P78415 501 aaPredicted RBP8.42□□□□□ -1.06
PUDP-204ENST00000486446 ZYXQ15942 572 aaKnown RBP8.42□□□□□ -1.06
PUDP-204ENST00000486446 NBPF11Q86T75 865 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 ANKRD13CQ8N6S4 541 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 KBTBD3Q8NAB2 608 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 RAET1EQ8TD07 263 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 ARMC5Q96C12 935 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 TMX3Q96JJ7 454 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 CALR3Q96L12 384 aaKnown RBP8.42□□□□□ -1.06
PUDP-204ENST00000486446 ASCC2Q9H1I8 757 aaPredicted RBP8.42□□□□□ -1.06
PUDP-204ENST00000486446 DIAPH3Q9NSV4 1193 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 ATP8A2Q9NTI2 1148 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 LMBRD1Q9NUN5 540 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 CUEDC1Q9NWM3 386 aaPredicted RBP8.42□□□□□ -1.06
PUDP-204ENST00000486446 TFIP11Q9UBB9 837 aaKnown RBP8.42□□□□□ -1.06
PUDP-204ENST00000486446 SRRDQ9UH36 339 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 CEP290O15078 2479 aa8.42□□□□□ -1.06
PUDP-204ENST00000486446 MGAMO43451 1857 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 USP17L12C9JPN9 530 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 USP17L21D6R901 530 aa8.41□□□□□ -1.06
PUDP-204ENST00000486446 TNPO2O14787 897 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms