RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.29■■□□□ 1
CLDN11-206ENST00000486429 ZBTB5O15062 677 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 DDAH1O94760 285 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 TLK2Q86UE8 772 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 HOMER1Q86YM7 354 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 MCF2L2Q86YR7 1114 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 ZNF654Q8IZM8 581 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 PCSK9Q8NBP7 692 aaKnown RBP21.29■■□□□ 1
CLDN11-206ENST00000486429 DNERQ8NFT8 737 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 NUP133Q8WUM0 1156 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 MTMR8Q96EF0 704 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 GDF15Q99988 308 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 PRKAG2Q9UGJ0 569 aa21.29■■□□□ 1
CLDN11-206ENST00000486429 A0A1W2PPC1 479 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 B4DLN1 442 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 SH2B2O14492 632 aaPredicted RBP21.28■■□□□ 1
CLDN11-206ENST00000486429 SLC34A2O95436 690 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 MAGEA10P43363 369 aaPredicted RBP21.28■■□□□ 1
CLDN11-206ENST00000486429 MRPL12P52815 198 aaKnown RBP21.28■■□□□ 1
CLDN11-206ENST00000486429 PDE4DQ08499 809 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 KCNA10Q16322 511 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 C1orf53Q5VUE5 145 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 TAPT1Q6NXT6 567 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 NFXL1Q6ZNB6 911 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 CTCFLQ8NI51 663 aaPredicted RBP21.28■■□□□ 1
CLDN11-206ENST00000486429 GPHNQ9NQX3 736 aaPredicted RBP21.28■■□□□ 1
CLDN11-206ENST00000486429 STARD7Q9NQZ5 370 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 PDGFCQ9NRA1 345 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 DNAH12Q6ZR08 3092 aa21.28■■□□□ 1
CLDN11-206ENST00000486429 CCDC69A6NI79 296 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 SMPD1P17405 629 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 EDNRBP24530 442 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 KIF5BP33176 963 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 IRX5P78411 483 aaPredicted RBP21.27■■□□□ 1
CLDN11-206ENST00000486429 TRAF1Q13077 416 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 SLC35G1Q2M3R5 365 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 GNASQ5JWF2 1037 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 IQSEC1Q6DN90 963 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 CCSAPQ6IQ19 270 aaPredicted RBP21.27■■□□□ 1
CLDN11-206ENST00000486429 SYTL5Q8TDW5 730 aaPredicted RBP21.27■■□□□ 1
CLDN11-206ENST00000486429 GLT1D1Q96MS3 346 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 AP5M1Q9H0R1 490 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 RIOX1Q9H6W3 641 aa21.27■■□□□ 1
CLDN11-206ENST00000486429 GNEQ9Y223 722 aaKnown RBP21.27■■□□□ 1
CLDN11-206ENST00000486429 PPP1R11O60927 126 aaPredicted RBP21.26■□□□□ 0.99
CLDN11-206ENST00000486429 NKX3-2P78367 333 aa21.26■□□□□ 0.99
CLDN11-206ENST00000486429 TMTC2Q8N394 836 aa21.26■□□□□ 0.99
CLDN11-206ENST00000486429 PIGSQ96S52 555 aa21.26■□□□□ 0.99
CLDN11-206ENST00000486429 MAP3K14Q99558 947 aa21.26■□□□□ 0.99
CLDN11-206ENST00000486429 MYL10Q9BUA6 226 aa21.26■□□□□ 0.99
CLDN11-206ENST00000486429 PRDM5Q9NQX1 630 aaPredicted RBP21.26■□□□□ 0.99
CLDN11-206ENST00000486429 PCDHA1Q9Y5I3 950 aa21.26■□□□□ 0.99
CLDN11-206ENST00000486429 LTBP2Q14767 1821 aa21.26■□□□□ 0.99
CLDN11-206ENST00000486429 RANBP2P49792 3224 aaKnown RBP21.26■□□□□ 0.99
CLDN11-206ENST00000486429 CYTH3O43739 400 aa21.25■□□□□ 0.99
CLDN11-206ENST00000486429 ASGR1P07306 291 aa21.25■□□□□ 0.99
CLDN11-206ENST00000486429 LIFRP42702 1097 aa21.25■□□□□ 0.99
CLDN11-206ENST00000486429 FXR1P51114 621 aaKnown RBP eCLIP21.25■□□□□ 0.99
CLDN11-206ENST00000486429 BEX3Q00994 111 aa21.25■□□□□ 0.99
CLDN11-206ENST00000486429 TLE2Q04725 743 aa21.25■□□□□ 0.99
CLDN11-206ENST00000486429 COL9A3Q14050 684 aaPredicted RBP21.25■□□□□ 0.99
CLDN11-206ENST00000486429 TBC1D5Q92609 795 aa21.25■□□□□ 0.99
CLDN11-206ENST00000486429 PCDH10Q9P2E7 1040 aa21.25■□□□□ 0.99
CLDN11-206ENST00000486429 CTAGE5O15320 804 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 PQBP1O60828 265 aaKnown RBP21.24■□□□□ 0.99
CLDN11-206ENST00000486429 CFBP00751 764 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 CENPBP07199 599 aaPredicted RBP21.24■□□□□ 0.99
CLDN11-206ENST00000486429 BMP8BP34820 402 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 FSCN1Q16658 493 aaKnown RBP21.24■□□□□ 0.99
CLDN11-206ENST00000486429 DUSP28Q4G0W2 176 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 NEK1Q96PY6 1258 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 LBHD1Q9BQE6 289 aaPredicted RBP21.24■□□□□ 0.99
CLDN11-206ENST00000486429 WDR11Q9BZH6 1224 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 UBE2OQ9C0C9 1292 aaKnown RBP21.24■□□□□ 0.99
CLDN11-206ENST00000486429 PDLIM7Q9NR12 457 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 COL20A1Q9P218 1284 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 Q9Y3F1 56 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 ELP1O95163 1332 aa21.24■□□□□ 0.99
CLDN11-206ENST00000486429 PNMA6FA0A0J9YX94 578 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 RBM47A0AV96 593 aaKnown RBP21.23■□□□□ 0.99
CLDN11-206ENST00000486429 OPLAHO14841 1288 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 DYNC1LI2O43237 492 aaPredicted RBP21.23■□□□□ 0.99
CLDN11-206ENST00000486429 CALM1P0DP23 149 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 CALM2P0DP24 149 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 CALM3P0DP25 149 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 PTGS1P23219 599 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 MDM2Q00987 491 aaPredicted RBP21.23■□□□□ 0.99
CLDN11-206ENST00000486429 GHRHRQ02643 423 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 KRT32Q14532 448 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 PPP2R5BQ15173 497 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 NSUN6Q8TEA1 469 aaKnown RBP21.23■□□□□ 0.99
CLDN11-206ENST00000486429 SCFD2Q8WU76 684 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 TAAR1Q96RJ0 339 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 RMDN3Q96TC7 470 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 SPZ1Q9BXG8 430 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 LRRC2Q9BYS8 371 aa21.23■□□□□ 0.99
CLDN11-206ENST00000486429 ZEB2O60315 1214 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 CLTBP09497 229 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 GNAQP50148 359 aa21.22■□□□□ 0.99
CLDN11-206ENST00000486429 HSD17B4P51659 736 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms