RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 RGS22Q8NE09 1264 aa19.38■□□□□ 0.69
CCHCR1-214ENST00000486060 MTA3Q9BTC8 594 aa19.38■□□□□ 0.69
CCHCR1-214ENST00000486060 UPF3AQ9H1J1 476 aaKnown RBP19.38■□□□□ 0.69
CCHCR1-214ENST00000486060 GNEQ9Y223 722 aaKnown RBP19.38■□□□□ 0.69
CCHCR1-214ENST00000486060 EDNRBP24530 442 aa19.37■□□□□ 0.69
CCHCR1-214ENST00000486060 RTP1P59025 263 aa19.37■□□□□ 0.69
CCHCR1-214ENST00000486060 SNX17Q15036 470 aa19.37■□□□□ 0.69
CCHCR1-214ENST00000486060 TSGA10IPQ3SY00 556 aa19.37■□□□□ 0.69
CCHCR1-214ENST00000486060 HABP4Q5JVS0 413 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-214ENST00000486060 PIGSQ96S52 555 aa19.37■□□□□ 0.69
CCHCR1-214ENST00000486060 RBM27Q9P2N5 1060 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-214ENST00000486060 ZBTB5O15062 677 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 SMPD1P17405 629 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 GJA9P57773 515 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 EXOSC10Q01780 885 aaKnown RBP19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 CASC1Q6TDU7 716 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 CATIPQ7Z7H3 387 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 RNF180Q86T96 592 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 SYTL5Q8TDW5 730 aaPredicted RBP19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 NUP133Q8WUM0 1156 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 KCNB2Q92953 911 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 TMEM87BQ96K49 555 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 TCEANC2Q96MN5 208 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 TAAR1Q96RJ0 339 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 ADD3Q9UEY8 706 aaKnown RBP19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 DOCK5Q9H7D0 1870 aa19.36■□□□□ 0.69
CCHCR1-214ENST00000486060 SZT2Q5T011 3432 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 A0A1W2PQ45 241 aaPredicted RBP19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 A0A1W2PQY0 241 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 DDAH1O94760 285 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 RXRAP19793 462 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 CST5P28325 142 aaPredicted RBP19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 LIFRP42702 1097 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 NKX3-2P78367 333 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 TNFAIP2Q03169 654 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 KCNA10Q16322 511 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 HOMER1Q86YM7 354 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 RAB11FIP4Q86YS3 637 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 NEK1Q96PY6 1258 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 AMNQ9BXJ7 453 aa19.35■□□□□ 0.69
CCHCR1-214ENST00000486060 PLEKHA8P1O95397 391 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 C6orf222P0C671 652 aaPredicted RBP19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 ACLYP53396 1101 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 GHRHRQ02643 423 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 TRIM60Q495X7 471 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 RNF20Q5VTR2 975 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 ERICH6BQ5W0A0 696 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 DNERQ8NFT8 737 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 MAP3K14Q99558 947 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 GDF15Q99988 308 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 TSEN34Q9BSV6 310 aaKnown RBP19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 VTA1Q9NP79 307 aa19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 MRPL11Q9Y3B7 192 aaKnown RBP19.34■□□□□ 0.69
CCHCR1-214ENST00000486060 LOC102724159A0A0B4J2E5 919 aa19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 RBM47A0AV96 593 aaKnown RBP19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 HSD17B4P51659 736 aa19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 BEX3Q00994 111 aa19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 PWP2Q15269 919 aaKnown RBP19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 IQSEC1Q6DN90 963 aa19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 SRBD1Q8N5C6 995 aaKnown RBP19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 PIBF1Q8WXW3 757 aa19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 ATP11BQ9Y2G3 1177 aa19.33■□□□□ 0.68
CCHCR1-214ENST00000486060 SCN10AQ9Y5Y9 1956 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 ASGR1P07306 291 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 CPA1P15085 419 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 HSPA4P34932 840 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 C1orf53Q5VUE5 145 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 TLK2Q86UE8 772 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 SGMS1Q86VZ5 419 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 CMTR1Q8N1G2 835 aaKnown RBP19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 SPZ1Q9BXG8 430 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 MAF1Q9H063 256 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 BRPF3Q9ULD4 1205 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 PCDHA1Q9Y5I3 950 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 SNX14Q9Y5W7 946 aa19.32■□□□□ 0.68
CCHCR1-214ENST00000486060 PNMA6FA0A0J9YX94 578 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 MOXD2PA6NHM9 499 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 CCDC69A6NI79 296 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 CFBP00751 764 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 MAGEA10P43363 369 aaPredicted RBP19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 GNASQ5JWF2 1037 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 NFXL1Q6ZNB6 911 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 DHX32Q7L7V1 743 aaKnown RBP19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 SH3RF1Q7Z6J0 888 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 MCF2L2Q86YR7 1114 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 TMTC2Q8N394 836 aa19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 CTCFLQ8NI51 663 aaPredicted RBP19.31■□□□□ 0.68
CCHCR1-214ENST00000486060 LAMA2P24043 3122 aaKnown RBP19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 DYNC1LI2O43237 492 aaPredicted RBP19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 ARIH2O95376 493 aa19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 TLE2Q04725 743 aa19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 PDE4DQ08499 809 aa19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 DUSP28Q4G0W2 176 aa19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 NOL8Q76FK4 1167 aaKnown RBP19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 RMDN3Q96TC7 470 aa19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 WDR11Q9BZH6 1224 aa19.3■□□□□ 0.68
CCHCR1-214ENST00000486060 SMARCA1P28370 1054 aa19.29■□□□□ 0.68
CCHCR1-214ENST00000486060 HOXA13P31271 388 aaPredicted RBP19.29■□□□□ 0.68
CCHCR1-214ENST00000486060 FXR1P51114 621 aaKnown RBP eCLIP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms