RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 UPF3AQ9H1J1 476 aaKnown RBP22.76■■□□□ 1.23
SNX5-213ENST00000486039 ATP11BQ9Y2G3 1177 aa22.76■■□□□ 1.23
SNX5-213ENST00000486039 DNAH12Q6ZR08 3092 aa22.76■■□□□ 1.23
SNX5-213ENST00000486039 LAMA3Q16787 3333 aa22.75■■□□□ 1.23
SNX5-213ENST00000486039 LOC102724159A0A0B4J2E5 919 aa22.75■■□□□ 1.23
SNX5-213ENST00000486039 SH2B2O14492 632 aaPredicted RBP22.75■■□□□ 1.23
SNX5-213ENST00000486039 PPP1R11O60927 126 aaPredicted RBP22.75■■□□□ 1.23
SNX5-213ENST00000486039 GJA9P57773 515 aa22.75■■□□□ 1.23
SNX5-213ENST00000486039 TNFAIP2Q03169 654 aa22.75■■□□□ 1.23
SNX5-213ENST00000486039 PWP2Q15269 919 aaKnown RBP22.75■■□□□ 1.23
SNX5-213ENST00000486039 CATIPQ7Z7H3 387 aa22.75■■□□□ 1.23
SNX5-213ENST00000486039 LBHD1Q9BQE6 289 aaPredicted RBP22.75■■□□□ 1.23
SNX5-213ENST00000486039 TSEN34Q9BSV6 310 aaKnown RBP22.75■■□□□ 1.23
SNX5-213ENST00000486039 RIOX1Q9H6W3 641 aa22.75■■□□□ 1.23
SNX5-213ENST00000486039 PRKAG2Q9UGJ0 569 aa22.75■■□□□ 1.23
SNX5-213ENST00000486039 GNEQ9Y223 722 aaKnown RBP22.75■■□□□ 1.23
SNX5-213ENST00000486039 LRRC37A2A6NM11 1700 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 A0A1W2PQ45 241 aaPredicted RBP22.74■■□□□ 1.23
SNX5-213ENST00000486039 A0A1W2PQY0 241 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 ZBTB5O15062 677 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 CTAGE5O15320 804 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 CYTH3O43739 400 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 SMPD1P17405 629 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 PTGS1P23219 599 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 CST5P28325 142 aaPredicted RBP22.74■■□□□ 1.23
SNX5-213ENST00000486039 KCNA10Q16322 511 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 TMEM63BQ5T3F8 832 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 C1orf53Q5VUE5 145 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 ZNF654Q8IZM8 581 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 NUP133Q8WUM0 1156 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 TMEM87BQ96K49 555 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 MYL10Q9BUA6 226 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 AMNQ9BXJ7 453 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 VTA1Q9NP79 307 aa22.74■■□□□ 1.23
SNX5-213ENST00000486039 MRPL11Q9Y3B7 192 aaKnown RBP22.74■■□□□ 1.23
SNX5-213ENST00000486039 C6orf222P0C671 652 aaPredicted RBP22.73■■□□□ 1.23
SNX5-213ENST00000486039 ACLYP53396 1101 aa22.73■■□□□ 1.23
SNX5-213ENST00000486039 TRIM60Q495X7 471 aa22.73■■□□□ 1.23
SNX5-213ENST00000486039 RNF20Q5VTR2 975 aa22.73■■□□□ 1.23
SNX5-213ENST00000486039 RASEFQ8IZ41 740 aa22.73■■□□□ 1.23
SNX5-213ENST00000486039 DNERQ8NFT8 737 aa22.73■■□□□ 1.23
SNX5-213ENST00000486039 PIGSQ96S52 555 aa22.73■■□□□ 1.23
SNX5-213ENST00000486039 MAF1Q9H063 256 aa22.73■■□□□ 1.23
SNX5-213ENST00000486039 MOXD2PA6NHM9 499 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 OPLAHO14841 1288 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 EDNRBP24530 442 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 NKX3-2P78367 333 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 IQSEC1Q6DN90 963 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 NOL8Q76FK4 1167 aaKnown RBP22.72■■□□□ 1.23
SNX5-213ENST00000486039 HOMER1Q86YM7 354 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 MCF2L2Q86YR7 1114 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 SYTL5Q8TDW5 730 aaPredicted RBP22.72■■□□□ 1.23
SNX5-213ENST00000486039 TAAR1Q96RJ0 339 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 MAP3K14Q99558 947 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 LRRC2Q9BYS8 371 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 SPC25Q9HBM1 224 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 COL20A1Q9P218 1284 aa22.72■■□□□ 1.23
SNX5-213ENST00000486039 DDAH1O94760 285 aa22.71■■□□□ 1.23
SNX5-213ENST00000486039 LIFRP42702 1097 aa22.71■■□□□ 1.23
SNX5-213ENST00000486039 TSGA10IPQ3SY00 556 aa22.71■■□□□ 1.23
SNX5-213ENST00000486039 TMTC2Q8N394 836 aa22.71■■□□□ 1.23
SNX5-213ENST00000486039 PPP4R2Q9NY27 417 aa22.71■■□□□ 1.23
SNX5-213ENST00000486039 RBM47A0AV96 593 aaKnown RBP22.7■■□□□ 1.22
SNX5-213ENST00000486039 ASGR1P07306 291 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 BEX3Q00994 111 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 ADCK5Q3MIX3 580 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 GNASQ5JWF2 1037 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 NFXL1Q6ZNB6 911 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 TLK2Q86UE8 772 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 DEFB123Q8N688 67 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 PCSK9Q8NBP7 692 aaKnown RBP22.7■■□□□ 1.22
SNX5-213ENST00000486039 NEK1Q96PY6 1258 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 STARD7Q9NQZ5 370 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 PCDHA1Q9Y5I3 950 aa22.7■■□□□ 1.22
SNX5-213ENST00000486039 CCDC69A6NI79 296 aa22.69■■□□□ 1.22
SNX5-213ENST00000486039 DYNC1LI2O43237 492 aaPredicted RBP22.69■■□□□ 1.22
SNX5-213ENST00000486039 PDE4DQ08499 809 aa22.69■■□□□ 1.22
SNX5-213ENST00000486039 ERICH6BQ5W0A0 696 aa22.69■■□□□ 1.22
SNX5-213ENST00000486039 CTCFLQ8NI51 663 aaPredicted RBP22.69■■□□□ 1.22
SNX5-213ENST00000486039 PRDM5Q9NQX1 630 aaPredicted RBP22.69■■□□□ 1.22
SNX5-213ENST00000486039 Q9Y3F1 56 aa22.69■■□□□ 1.22
SNX5-213ENST00000486039 PNMA6FA0A0J9YX94 578 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 CFBP00751 764 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 RXRAP19793 462 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 HSD17B4P51659 736 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 EXOSC10Q01780 885 aaKnown RBP22.68■■□□□ 1.22
SNX5-213ENST00000486039 GHRHRQ02643 423 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 TLE2Q04725 743 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 DUSP28Q4G0W2 176 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 MPHOSPH6Q99547 160 aaKnown RBP22.68■■□□□ 1.22
SNX5-213ENST00000486039 WDR11Q9BZH6 1224 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 PDLIM7Q9NR12 457 aa22.68■■□□□ 1.22
SNX5-213ENST00000486039 KIF5BP33176 963 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 Q7L0L9 218 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 SH3RF1Q7Z6J0 888 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 RAB11FIP4Q86YS3 637 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 NSUN6Q8TEA1 469 aaKnown RBP22.67■■□□□ 1.22
SNX5-213ENST00000486039 PIBF1Q8WXW3 757 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 KCNB2Q92953 911 aa22.67■■□□□ 1.22
SNX5-213ENST00000486039 TCEANC2Q96MN5 208 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms