RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 UBE2SQ16763 222 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 ATL3Q6DD88 541 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 CPXCR1Q8N123 301 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 REXO1Q8N1G1 1221 aaKnown RBP12.95□□□□□ -0.34
SND1-212ENST00000485871 FAM43AQ8N2R8 423 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 TBC1D5Q92609 795 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 CUL5Q93034 780 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 GLT8D2Q9H1C3 349 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 PSTPIP2Q9H939 334 aa12.95□□□□□ -0.34
SND1-212ENST00000485871 MRPL11Q9Y3B7 192 aaKnown RBP12.95□□□□□ -0.34
SND1-212ENST00000485871 ADGRA2Q96PE1 1338 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 GOLGA6L3A6NEY3 463 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 NFIBO00712 420 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 PEX10O60683 326 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 NASPP49321 788 aaPredicted RBP12.94□□□□□ -0.34
SND1-212ENST00000485871 HSD17B4P51659 736 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 MRPL12P52815 198 aaKnown RBP12.94□□□□□ -0.34
SND1-212ENST00000485871 KRT85P78386 507 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 IRX3P78415 501 aaPredicted RBP12.94□□□□□ -0.34
SND1-212ENST00000485871 PTPAQ15257 358 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 CSPP1Q1MSJ5 1256 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 RILPL1Q5EBL4 403 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 USP17L6PQ6QN14 398 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 KRT25Q7Z3Z0 450 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 MB21D1Q8N884 522 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 CRYGNQ8WXF5 182 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 SAGE1Q9NXZ1 904 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 RTEL1Q9NZ71 1219 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 TFIP11Q9UBB9 837 aaKnown RBP12.94□□□□□ -0.34
SND1-212ENST00000485871 RBPJLQ9UBG7 517 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 BIN2Q9UBW5 565 aaPredicted RBP12.94□□□□□ -0.34
SND1-212ENST00000485871 CLIC4Q9Y696 253 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 PLXNB2O15031 1838 aa12.94□□□□□ -0.34
SND1-212ENST00000485871 LRRC37A2A6NM11 1700 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
SND1-212ENST00000485871 PDHXO00330 501 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 TRPA1O75762 1119 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 ALAS1P13196 640 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 OSBPP22059 807 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 TRAPPC10P48553 1259 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 AP3B2Q13367 1082 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 GNL2Q13823 731 aaKnown RBP12.93□□□□□ -0.34
SND1-212ENST00000485871 JAKMIP3Q5VZ66 844 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
SND1-212ENST00000485871 RIOX2Q8IUF8 465 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 ZNF396Q96N95 335 aaPredicted RBP12.93□□□□□ -0.34
SND1-212ENST00000485871 TEX13BQ9BXU2 312 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 GDPD2Q9HCC8 539 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 TXNRD2Q9NNW7 524 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
SND1-212ENST00000485871 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
SND1-212ENST00000485871 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 PNMA3Q9UL41 463 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 PCDHB6Q9Y5E3 794 aa12.93□□□□□ -0.34
SND1-212ENST00000485871 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
SND1-212ENST00000485871 MORC2Q9Y6X9 1032 aaPredicted RBP12.93□□□□□ -0.34
SND1-212ENST00000485871 ELP1O95163 1332 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 IGF2BP3O00425 579 aaKnown RBP eCLIP12.92□□□□□ -0.34
SND1-212ENST00000485871 FIBPO43427 364 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 YEATS4O95619 227 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 CYP2C8P10632 490 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 STAT3P40763 770 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
SND1-212ENST00000485871 INF2Q27J81 1249 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 TKFCQ3LXA3 575 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 SNRNP48Q6IEG0 339 aaKnown RBP12.92□□□□□ -0.34
SND1-212ENST00000485871 CTU1Q7Z7A3 348 aaKnown RBP12.92□□□□□ -0.34
SND1-212ENST00000485871 SAMD3Q8N6K7 520 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 LINC00301Q8NCQ3 95 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 GTF3C2Q8WUA4 911 aaPredicted RBP12.92□□□□□ -0.34
SND1-212ENST00000485871 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
SND1-212ENST00000485871 CCDC102AQ96A19 550 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 PGBD1Q96JS3 809 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 ANO3Q9BYT9 981 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 MAF1Q9H063 256 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 RNF146Q9NTX7 359 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 LMBRD1Q9NUN5 540 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 MAP3K20Q9NYL2 800 aaKnown RBP12.92□□□□□ -0.34
SND1-212ENST00000485871 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 PLXNA1Q9UIW2 1896 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 CFAP45Q9UL16 551 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 RABGAP1Q9Y3P9 1069 aa12.92□□□□□ -0.34
SND1-212ENST00000485871 FRMPD4Q14CM0 1322 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 ZNF236Q9UL36 1845 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 CCDC194A0A1B0GVG4 234 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
SND1-212ENST00000485871 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
SND1-212ENST00000485871 SF3A1Q15459 793 aaKnown RBP12.91□□□□□ -0.34
SND1-212ENST00000485871 Q3C1V9 767 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 TTC38Q5R3I4 469 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 MCTP2Q6DN12 878 aa12.91□□□□□ -0.34
SND1-212ENST00000485871 TBCKQ8TEA7 893 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms