RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 BTBD18B2RXH4 712 aa20.15■□□□□ 0.82
CHMP3-207ENST00000485465 M0R2N6 131 aa20.15■□□□□ 0.82
CHMP3-207ENST00000485465 HOXA13P31271 388 aaPredicted RBP20.15■□□□□ 0.82
CHMP3-207ENST00000485465 CLK2P49760 499 aaKnown RBP20.15■□□□□ 0.82
CHMP3-207ENST00000485465 RNF207Q6ZRF8 634 aa20.15■□□□□ 0.82
CHMP3-207ENST00000485465 BEGAINQ9BUH8 593 aa20.15■□□□□ 0.82
CHMP3-207ENST00000485465 A1CFQ9NQ94 594 aaKnown RBP20.15■□□□□ 0.82
CHMP3-207ENST00000485465 CYP39A1Q9NYL5 469 aa20.15■□□□□ 0.82
CHMP3-207ENST00000485465 BIN2Q9UBW5 565 aaPredicted RBP20.15■□□□□ 0.82
CHMP3-207ENST00000485465 FCER1AP12319 257 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 RPS6P62753 249 aaKnown RBP20.14■□□□□ 0.81
CHMP3-207ENST00000485465 PKP1Q13835 747 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 BAATQ14032 418 aaPredicted RBP20.14■□□□□ 0.81
CHMP3-207ENST00000485465 MCTP1Q6DN14 999 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 GPR142Q7Z601 462 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 PLEKHH3Q7Z736 793 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 REXO1Q8N1G1 1221 aaKnown RBP20.14■□□□□ 0.81
CHMP3-207ENST00000485465 ANKRD35Q8N283 1001 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 MMP19Q99542 508 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 FOXP1Q9H334 677 aaPredicted RBP20.14■□□□□ 0.81
CHMP3-207ENST00000485465 WBP1LQ9NX94 342 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 PCDHA6Q9UN73 950 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 PCDHA8Q9Y5H6 950 aa20.14■□□□□ 0.81
CHMP3-207ENST00000485465 PFASO15067 1338 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 STRNO43815 780 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 SP3Q02447 781 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 NR5A1Q13285 461 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 KCTD2Q14681 263 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 JAKMIP3Q5VZ66 844 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 MCTP2Q6DN12 878 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 SLC30A10Q6XR72 485 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 RASGRP4Q8TDF6 673 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 SYTL5Q8TDW5 730 aaPredicted RBP20.13■□□□□ 0.81
CHMP3-207ENST00000485465 TNFRSF25Q93038 417 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 TMEM260Q9NX78 707 aa20.13■□□□□ 0.81
CHMP3-207ENST00000485465 CIZ1Q9ULV3 898 aaPredicted RBP20.13■□□□□ 0.81
CHMP3-207ENST00000485465 KIF28PB7ZC32 967 aa20.12■□□□□ 0.81
CHMP3-207ENST00000485465 GPR25O00155 361 aa20.12■□□□□ 0.81
CHMP3-207ENST00000485465 BRD1O95696 1058 aa20.12■□□□□ 0.81
CHMP3-207ENST00000485465 ZSCAN22P10073 491 aaPredicted RBP20.12■□□□□ 0.81
CHMP3-207ENST00000485465 PTPREP23469 700 aa20.12■□□□□ 0.81
CHMP3-207ENST00000485465 U2AF2P26368 475 aaKnown RBP eCLIP20.12■□□□□ 0.81
CHMP3-207ENST00000485465 NUCB2P80303 420 aa20.12■□□□□ 0.81
CHMP3-207ENST00000485465 GNL2Q13823 731 aaKnown RBP20.12■□□□□ 0.81
CHMP3-207ENST00000485465 NOM1Q5C9Z4 860 aaKnown RBP20.12■□□□□ 0.81
CHMP3-207ENST00000485465 ABRAQ8N0Z2 381 aa20.12■□□□□ 0.81
CHMP3-207ENST00000485465 IVNS1ABPQ9Y6Y0 642 aa20.12■□□□□ 0.81
CHMP3-207ENST00000485465 ECM2O94769 699 aaPredicted RBP20.11■□□□□ 0.81
CHMP3-207ENST00000485465 FOSP01100 380 aaPredicted RBP20.11■□□□□ 0.81
CHMP3-207ENST00000485465 LACTBP83111 547 aaPredicted RBP20.11■□□□□ 0.81
CHMP3-207ENST00000485465 AP3B2Q13367 1082 aa20.11■□□□□ 0.81
CHMP3-207ENST00000485465 KRT25Q7Z3Z0 450 aa20.11■□□□□ 0.81
CHMP3-207ENST00000485465 FCHSD1Q86WN1 690 aa20.11■□□□□ 0.81
CHMP3-207ENST00000485465 COL20A1Q9P218 1284 aa20.11■□□□□ 0.81
CHMP3-207ENST00000485465 ZDHHC9Q9Y397 364 aa20.11■□□□□ 0.81
CHMP3-207ENST00000485465 SLC15A5A6NIM6 579 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 SPDYE3A6NKU9 549 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 POTEB2H3BUK9 544 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 CTGFP29279 349 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 FCGRTP55899 365 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 RESTQ13127 1097 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 GRB14Q14449 540 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 FOXD4L5Q5VV16 416 aaPredicted RBP20.1■□□□□ 0.81
CHMP3-207ENST00000485465 FERMT3Q86UX7 667 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 JMYQ8N9B5 988 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 FOXD4L4Q8WXT5 416 aaPredicted RBP20.1■□□□□ 0.81
CHMP3-207ENST00000485465 TAAR1Q96RJ0 339 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
CHMP3-207ENST00000485465 RBBP6Q7Z6E9 1792 aaKnown RBP20.1■□□□□ 0.81
CHMP3-207ENST00000485465 DNAJC25-GNG10A0A024R161 153 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 CCDC194A0A1B0GVG4 234 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 TNPO2O14787 897 aaKnown RBP20.09■□□□□ 0.81
CHMP3-207ENST00000485465 PGK2P07205 417 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 ADORA2AP29274 412 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 PSMC4P43686 418 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 KIF22Q14807 665 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 EARS2Q5JPH6 523 aaKnown RBP20.09■□□□□ 0.81
CHMP3-207ENST00000485465 PIK3AP1Q6ZUJ8 805 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 FAM133AQ8N9E0 248 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 PGBD1Q96JS3 809 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 PURBQ96QR8 312 aaKnown RBP20.09■□□□□ 0.81
CHMP3-207ENST00000485465 ANO3Q9BYT9 981 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 ARHGAP39Q9C0H5 1083 aa20.09■□□□□ 0.81
CHMP3-207ENST00000485465 ZSCAN16Q9H4T2 348 aaPredicted RBP20.09■□□□□ 0.81
CHMP3-207ENST00000485465 FKTNO75072 461 aa20.08■□□□□ 0.81
CHMP3-207ENST00000485465 F13A1P00488 732 aa20.08■□□□□ 0.81
CHMP3-207ENST00000485465 CNTN2Q02246 1040 aa20.08■□□□□ 0.81
CHMP3-207ENST00000485465 NONOQ15233 471 aaKnown RBP eCLIP20.08■□□□□ 0.812e-8■□□□□ 11
CHMP3-207ENST00000485465 MORN1Q5T089 497 aa20.08■□□□□ 0.81
CHMP3-207ENST00000485465 BRAPQ7Z569 592 aa20.08■□□□□ 0.81
CHMP3-207ENST00000485465 TRIM47Q96LD4 638 aa20.08■□□□□ 0.81
CHMP3-207ENST00000485465 EHMT1Q9H9B1 1298 aa20.08■□□□□ 0.81
CHMP3-207ENST00000485465 TSKSQ9UJT2 592 aa20.08■□□□□ 0.81
CHMP3-207ENST00000485465 FAM205CA6NFA0 338 aa20.07■□□□□ 0.8
CHMP3-207ENST00000485465 COBLO75128 1261 aa20.07■□□□□ 0.8
CHMP3-207ENST00000485465 DNERQ8NFT8 737 aa20.07■□□□□ 0.8
CHMP3-207ENST00000485465 CD99L2Q8TCZ2 262 aa20.07■□□□□ 0.8
CHMP3-207ENST00000485465 ZNF296Q8WUU4 475 aaPredicted RBP20.07■□□□□ 0.8
CHMP3-207ENST00000485465 RMDN3Q96TC7 470 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms