RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 CDH23Q9H251 3354 aa20.78■□□□□ 0.92
RNF38-207ENST00000484621 CALML3P27482 149 aa20.78■□□□□ 0.92
RNF38-207ENST00000484621 TROAPQ12815 778 aa20.78■□□□□ 0.92
RNF38-207ENST00000484621 SHHQ15465 462 aa20.78■□□□□ 0.92
RNF38-207ENST00000484621 ZNF654Q8IZM8 581 aa20.78■□□□□ 0.92
RNF38-207ENST00000484621 TMTC2Q8N394 836 aa20.78■□□□□ 0.92
RNF38-207ENST00000484621 ADD3Q9UEY8 706 aaKnown RBP20.78■□□□□ 0.92
RNF38-207ENST00000484621 CCDC69A6NI79 296 aa20.77■□□□□ 0.92
RNF38-207ENST00000484621 SLC30A10Q6XR72 485 aa20.77■□□□□ 0.92
RNF38-207ENST00000484621 NEK1Q96PY6 1258 aa20.77■□□□□ 0.92
RNF38-207ENST00000484621 PURBQ96QR8 312 aaKnown RBP20.77■□□□□ 0.92
RNF38-207ENST00000484621 MYL10Q9BUA6 226 aa20.77■□□□□ 0.92
RNF38-207ENST00000484621 LRRC2Q9BYS8 371 aa20.77■□□□□ 0.92
RNF38-207ENST00000484621 SENP6Q9GZR1 1112 aaPredicted RBP20.77■□□□□ 0.92
RNF38-207ENST00000484621 SEMA6BQ9H3T3 888 aa20.77■□□□□ 0.92
RNF38-207ENST00000484621 SH2B2O14492 632 aaPredicted RBP20.76■□□□□ 0.91
RNF38-207ENST00000484621 DDAH1O94760 285 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 REC8O95072 547 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 PGK1P00558 417 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 COL9A3Q14050 684 aaPredicted RBP20.76■□□□□ 0.91
RNF38-207ENST00000484621 KRT32Q14532 448 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 LRRC41Q15345 812 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 CCDC144BQ3MJ40 725 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 HOMER1Q86YM7 354 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 CTCFLQ8NI51 663 aaPredicted RBP20.76■□□□□ 0.91
RNF38-207ENST00000484621 LENG1Q96BZ8 264 aaPredicted RBP20.76■□□□□ 0.91
RNF38-207ENST00000484621 AMNQ9BXJ7 453 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 MRPL11Q9Y3B7 192 aaKnown RBP20.76■□□□□ 0.91
RNF38-207ENST00000484621 ASTN1O14525 1302 aa20.76■□□□□ 0.91
RNF38-207ENST00000484621 LRRC37A2A6NM11 1700 aa20.75■□□□□ 0.91
RNF38-207ENST00000484621 LIFRP42702 1097 aa20.75■□□□□ 0.91
RNF38-207ENST00000484621 ALDH5A1P51649 535 aaPredicted RBP20.75■□□□□ 0.91
RNF38-207ENST00000484621 RPS6P62753 249 aaKnown RBP20.75■□□□□ 0.91
RNF38-207ENST00000484621 RNF180Q86T96 592 aa20.75■□□□□ 0.91
RNF38-207ENST00000484621 RASEFQ8IZ41 740 aa20.75■□□□□ 0.91
RNF38-207ENST00000484621 USP38Q8NB14 1042 aa20.75■□□□□ 0.91
RNF38-207ENST00000484621 DDX49Q9Y6V7 483 aaKnown RBP20.75■□□□□ 0.91
RNF38-207ENST00000484621 ZBTB5O15062 677 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 KIF5BP33176 963 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 EEPD1Q7L9B9 569 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 MCF2L2Q86YR7 1114 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 RGS22Q8NE09 1264 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 MTMR8Q96EF0 704 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 MAP3K14Q99558 947 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 RIOX1Q9H6W3 641 aa20.74■□□□□ 0.91
RNF38-207ENST00000484621 DUSP11O75319 330 aaKnown RBP20.73■□□□□ 0.91
RNF38-207ENST00000484621 RTP1P59025 263 aa20.73■□□□□ 0.91
RNF38-207ENST00000484621 ADCK5Q3MIX3 580 aa20.73■□□□□ 0.91
RNF38-207ENST00000484621 NOL8Q76FK4 1167 aaKnown RBP20.73■□□□□ 0.91
RNF38-207ENST00000484621 FBXO16Q8IX29 292 aaPredicted RBP20.73■□□□□ 0.91
RNF38-207ENST00000484621 PIBF1Q8WXW3 757 aa20.73■□□□□ 0.91
RNF38-207ENST00000484621 PIGSQ96S52 555 aa20.73■□□□□ 0.91
RNF38-207ENST00000484621 MPHOSPH6Q99547 160 aaKnown RBP20.73■□□□□ 0.91
RNF38-207ENST00000484621 LBHD1Q9BQE6 289 aaPredicted RBP20.73■□□□□ 0.91
RNF38-207ENST00000484621 KATNBL1Q9H079 304 aa20.73■□□□□ 0.91
RNF38-207ENST00000484621 SLC12A7Q9Y666 1083 aa20.73■□□□□ 0.91
RNF38-207ENST00000484621 SYNRGQ9UMZ2 1314 aa20.73■□□□□ 0.91
RNF38-207ENST00000484621 LOC102724159A0A0B4J2E5 919 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 CALM1P0DP23 149 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 CALM2P0DP24 149 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 CALM3P0DP25 149 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 COL9A1P20849 921 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 ADCYAP1R1P41586 468 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 TRAF1Q13077 416 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 PWP2Q15269 919 aaKnown RBP20.72■□□□□ 0.91
RNF38-207ENST00000484621 SLC35G1Q2M3R5 365 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 SYNE3Q6ZMZ3 975 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 DHX32Q7L7V1 743 aaKnown RBP20.72■□□□□ 0.91
RNF38-207ENST00000484621 DNERQ8NFT8 737 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 FERMT2Q96AC1 680 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 TCEANC2Q96MN5 208 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 SPC25Q9HBM1 224 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 PCDHA1Q9Y5I3 950 aa20.72■□□□□ 0.91
RNF38-207ENST00000484621 B4DLN1 442 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 CYTH3O43739 400 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
RNF38-207ENST00000484621 RXRAP19793 462 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 HSPA4P34932 840 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 GNAQP50148 359 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 MRPL12P52815 198 aaKnown RBP20.71■□□□□ 0.91
RNF38-207ENST00000484621 TNFAIP2Q03169 654 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 PDE4DQ08499 809 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 RAB11FIP4Q86YS3 637 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 MORC4Q8TE76 937 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 TBC1D5Q92609 795 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 MAF1Q9H063 256 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 VTA1Q9NP79 307 aa20.71■□□□□ 0.91
RNF38-207ENST00000484621 PNMA6FA0A0J9YX94 578 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.7■□□□□ 0.9
RNF38-207ENST00000484621 ADCY6O43306 1168 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 PPP1R11O60927 126 aaPredicted RBP20.7■□□□□ 0.9
RNF38-207ENST00000484621 ADAMTS4O75173 837 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 CFBP00751 764 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 C6orf222P0C671 652 aaPredicted RBP20.7■□□□□ 0.9
RNF38-207ENST00000484621 FGD1P98174 961 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 SH3RF1Q7Z6J0 888 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 MICU3Q86XE3 530 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 LZTS2Q9BRK4 669 aa20.7■□□□□ 0.9
RNF38-207ENST00000484621 PDGFCQ9NRA1 345 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms