RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 A0A1W2PQY0 241 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 CTAGE5O15320 804 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 PPP1R11O60927 126 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-209ENST00000484305 C6orf222P0C671 652 aaPredicted RBP15.01□□□□□ -0.01
HDAC1-209ENST00000484305 SMPD1P17405 629 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 PTGS1P23219 599 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 ACLYP53396 1101 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 GJA9P57773 515 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 SNX17Q15036 470 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 TRIM60Q495X7 471 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 TMEM63BQ5T3F8 832 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 CATIPQ7Z7H3 387 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 GDF15Q99988 308 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 TSEN34Q9BSV6 310 aaKnown RBP15.01□□□□□ -0.01
HDAC1-209ENST00000484305 MTA3Q9BTC8 594 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 MYL10Q9BUA6 226 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 AMNQ9BXJ7 453 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 RIOX1Q9H6W3 641 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 VTA1Q9NP79 307 aa15.01□□□□□ -0.01
HDAC1-209ENST00000484305 GNEQ9Y223 722 aaKnown RBP15.01□□□□□ -0.01
HDAC1-209ENST00000484305 LOC102724159A0A0B4J2E5 919 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 SH2B2O14492 632 aaPredicted RBP15□□□□□ -0.01
HDAC1-209ENST00000484305 ZBTB5O15062 677 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 CYTH3O43739 400 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 CST5P28325 142 aaPredicted RBP15□□□□□ -0.01
HDAC1-209ENST00000484305 MAGEA10P43363 369 aaPredicted RBP15□□□□□ -0.01
HDAC1-209ENST00000484305 PWP2Q15269 919 aaKnown RBP15□□□□□ -0.01
HDAC1-209ENST00000484305 RNF20Q5VTR2 975 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 C1orf53Q5VUE5 145 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 IQSEC1Q6DN90 963 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 NOL8Q76FK4 1167 aaKnown RBP15□□□□□ -0.01
HDAC1-209ENST00000484305 ZNF654Q8IZM8 581 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 DNERQ8NFT8 737 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 NUP133Q8WUM0 1156 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 TMEM87BQ96K49 555 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 PIGSQ96S52 555 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 LRRC2Q9BYS8 371 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 COL20A1Q9P218 1284 aa15□□□□□ -0.01
HDAC1-209ENST00000484305 MRPL11Q9Y3B7 192 aaKnown RBP15□□□□□ -0.01
HDAC1-209ENST00000484305 MOXD2PA6NHM9 499 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 OPLAHO14841 1288 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 DDAH1O94760 285 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 ASGR1P07306 291 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 EDNRBP24530 442 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 BEX3Q00994 111 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 PDE4DQ08499 809 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 GNASQ5JWF2 1037 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 NFXL1Q6ZNB6 911 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 HOMER1Q86YM7 354 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 MCF2L2Q86YR7 1114 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 SYTL5Q8TDW5 730 aaPredicted RBP14.99□□□□□ -0.01
HDAC1-209ENST00000484305 TAAR1Q96RJ0 339 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 MAF1Q9H063 256 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 SPC25Q9HBM1 224 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 PCDHA1Q9Y5I3 950 aa14.99□□□□□ -0.01
HDAC1-209ENST00000484305 CCDC69A6NI79 296 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 DYNC1LI2O43237 492 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-209ENST00000484305 CFBP00751 764 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 LIFRP42702 1097 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 FXR1P51114 621 aaKnown RBP eCLIP14.98□□□□□ -0.01
HDAC1-209ENST00000484305 NKX3-2P78367 333 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 ADCK5Q3MIX3 580 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 TSGA10IPQ3SY00 556 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 TLK2Q86UE8 772 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 TMTC2Q8N394 836 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 PCSK9Q8NBP7 692 aaKnown RBP14.98□□□□□ -0.01
HDAC1-209ENST00000484305 MAP3K14Q99558 947 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 WDR11Q9BZH6 1224 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 STARD7Q9NQZ5 370 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 PPP4R2Q9NY27 417 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 LTBP2Q14767 1821 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 KIAA1217Q5T5P2 1943 aa14.98□□□□□ -0.01
HDAC1-209ENST00000484305 PNMA6FA0A0J9YX94 578 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 RBM47A0AV96 593 aaKnown RBP14.97□□□□□ -0.01
HDAC1-209ENST00000484305 RXRAP19793 462 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 BMP8BP34820 402 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 HSD17B4P51659 736 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 MDM2Q00987 491 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-209ENST00000484305 TLE2Q04725 743 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 DUSP28Q4G0W2 176 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 SH3RF1Q7Z6J0 888 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-209ENST00000484305 PIBF1Q8WXW3 757 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 MPHOSPH6Q99547 160 aaKnown RBP14.97□□□□□ -0.01
HDAC1-209ENST00000484305 AP5M1Q9H0R1 490 aa14.97□□□□□ -0.01
HDAC1-209ENST00000484305 B4DLN1 442 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 SLC34A2O95436 690 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 KIF5BP33176 963 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 MRPL12P52815 198 aaKnown RBP14.96□□□□□ -0.01
HDAC1-209ENST00000484305 EXOSC10Q01780 885 aaKnown RBP14.96□□□□□ -0.01
HDAC1-209ENST00000484305 FSCN1Q16658 493 aaKnown RBP14.96□□□□□ -0.01
HDAC1-209ENST00000484305 RAB11FIP4Q86YS3 637 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 NSUN6Q8TEA1 469 aaKnown RBP14.96□□□□□ -0.01
HDAC1-209ENST00000484305 TCEANC2Q96MN5 208 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 GLT1D1Q96MS3 346 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 RMDN3Q96TC7 470 aa14.96□□□□□ -0.01
HDAC1-209ENST00000484305 PRDM5Q9NQX1 630 aaPredicted RBP14.96□□□□□ -0.01
HDAC1-209ENST00000484305 PDLIM7Q9NR12 457 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms