RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 APPBP2Q92624 585 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 CRBNQ96SW2 442 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 VTA1Q9NP79 307 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 PTPRSQ13332 1948 aa15.17■□□□□ 0.02
DNMT3A-213ENST00000484184 GPAA1O43292 621 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 GTPBP6O43824 516 aaPredicted RBP15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 SUPT20HL2P0C7V6 817 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 ALAS1P13196 640 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 SNAP25P60880 206 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 RASGRP2Q7LDG7 609 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 FAM160B2Q86V87 743 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 PHOSPHO2Q8TCD6 241 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 CHURC1Q8WUH1 139 aa15.16■□□□□ 0.02
DNMT3A-213ENST00000484184 TANC1Q9C0D5 1861 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 M0R2C6 588 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 SMARCA5O60264 1052 aaPredicted RBP15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 MCCP23508 829 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 GRB10Q13322 594 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 TMEM31Q5JXX7 168 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 HERC6Q8IVU3 1022 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 IFNL3Q8IZI9 196 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 ARNTL2Q8WYA1 636 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 SLC9A7Q96T83 725 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 ZNF287Q9HBT7 754 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 CD320Q9NPF0 282 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 PRR12Q9ULL5 1215 aa15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 TRIP12Q14669 1992 aaPredicted RBP15.15■□□□□ 0.02
DNMT3A-213ENST00000484184 RBM47A0AV96 593 aaKnown RBP15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 RNF113AO15541 343 aaKnown RBP15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 GPR37L1O60883 481 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 IQCF3P0C7M6 154 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 TSPY3P0CV98 308 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 TSPY8P0CW00 308 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 SLC1A4P43007 532 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 TDO2P48775 406 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 TFAP4Q01664 338 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 RCSD1Q6JBY9 416 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 KCTD1Q719H9 257 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 PPP1R13LQ8WUF5 828 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 HLA-CQ95604 372 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 CHMP4CQ96CF2 233 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 ECHDC1Q9NTX5 307 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 HCN4Q9Y3Q4 1203 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 PCDHB15Q9Y5E8 787 aa15.14■□□□□ 0.01
DNMT3A-213ENST00000484184 COL4A4P53420 1690 aaPredicted RBP15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 PATL2C9JE40 543 aaKnown RBP15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 GNAT2P19087 354 aa15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 RFC2P35250 354 aa15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 GPNMBQ14956 572 aa15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 NBPF20Q3BBV1 942 aa15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 NSMFQ6X4W1 530 aa15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 IL17RBQ9NRM6 502 aa15.13■□□□□ 0.01
DNMT3A-213ENST00000484184 MYL3P08590 195 aa15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 ACTN1P12814 892 aa15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 IKQ13123 557 aaPredicted RBP15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 BAATQ14032 418 aaPredicted RBP15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 CTAGE1Q96RT6 745 aa15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 MTG1Q9BT17 334 aaPredicted RBP15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 DCTPP1Q9H773 170 aa15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
DNMT3A-213ENST00000484184 LCHNA4D1U4 455 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 FAM86C2PA6NEL3 165 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 PI4K2BG5E9Z4 385 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 NMT2O60551 498 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 APPP05067 770 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 ICAM1P05362 532 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 ZFYP08048 801 aaPredicted RBP15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 NOVP48745 357 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 CPT1AP50416 773 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 TSHZ3Q63HK5 1081 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 NFRKBQ6P4R8 1299 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 SEC62Q99442 399 aaKnown RBP15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 RANBP17Q9H2T7 1088 aaKnown RBP15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 ISY1Q9ULR0 285 aaKnown RBP15.11■□□□□ 0.01
DNMT3A-213ENST00000484184 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 A6NJR5 290 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 RBAK-RBAKDNI3L0D1 243 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 NFIBO00712 420 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 FOXP2O15409 715 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 PDE4BQ07343 736 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 PPARAQ07869 468 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 TTBK2Q6IQ55 1244 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 TMCO2Q7Z6W1 182 aaPredicted RBP15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 INCENPQ9NQS7 918 aa15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 ADD3Q9UEY8 706 aaKnown RBP15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
DNMT3A-213ENST00000484184 KIF28PB7ZC32 967 aa15.09■□□□□ 0.01
DNMT3A-213ENST00000484184 BAIAP3O94812 1187 aa15.09■□□□□ 0.01
DNMT3A-213ENST00000484184 EDNRBP24530 442 aa15.09■□□□□ 0.01
DNMT3A-213ENST00000484184 PTPN11Q06124 597 aaPredicted RBP15.09■□□□□ 0.01
DNMT3A-213ENST00000484184 FAM47CQ5HY64 1035 aa15.09■□□□□ 0.01
DNMT3A-213ENST00000484184 BTNL9Q6UXG8 535 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms