RNA–Protein interactions for RNA: ENST00000483595.1

PDCD4-207, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-207ENST00000483595 CCDC12Q8WUD4 166 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-207ENST00000483595 BPIFA3Q9BQP9 254 aa7.58□□□□□ -1.2
PDCD4-207ENST00000483595 SDF4Q9BRK5 362 aa7.58□□□□□ -1.2
PDCD4-207ENST00000483595 RTFDC1Q9BY42 306 aaPredicted RBP7.58□□□□□ -1.2
PDCD4-207ENST00000483595 GRIP2Q9C0E4 1043 aa7.58□□□□□ -1.2
PDCD4-207ENST00000483595 KAT14Q9H8E8 782 aa7.58□□□□□ -1.2
PDCD4-207ENST00000483595 FAM13BQ9NYF5 915 aa7.58□□□□□ -1.2
PDCD4-207ENST00000483595 SWAP70Q9UH65 585 aa7.58□□□□□ -1.2
PDCD4-207ENST00000483595 PCDHA7Q9UN72 937 aa7.58□□□□□ -1.2
PDCD4-207ENST00000483595 LRRC37AA6NMS7 1700 aa7.58□□□□□ -1.2
PDCD4-207ENST00000483595 TNRC6CQ9HCJ0 1690 aaKnown RBP7.57□□□□□ -1.2
PDCD4-207ENST00000483595 BRWD3Q6RI45 1802 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 TRIM75PA6NK02 468 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 MAN1A2O60476 641 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 TSPY3P0CV98 308 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 TSPY8P0CW00 308 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 MSNP26038 577 aaKnown RBP7.57□□□□□ -1.2
PDCD4-207ENST00000483595 GPC1P35052 558 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 GUCY1B3Q02153 619 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 ORC2Q13416 577 aaPredicted RBP7.57□□□□□ -1.2
PDCD4-207ENST00000483595 SNW1Q13573 536 aaKnown RBP7.57□□□□□ -1.2
PDCD4-207ENST00000483595 MFSD14BQ5SR56 506 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 FAM173BQ6P4H8 233 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 C16orf86Q6ZW13 317 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 COL23A1Q86Y22 540 aaPredicted RBP7.57□□□□□ -1.2
PDCD4-207ENST00000483595 ANKMY2Q8IV38 441 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 DIS3L2Q8IYB7 885 aaKnown RBP7.57□□□□□ -1.2
PDCD4-207ENST00000483595 TEX11Q8IYF3 940 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 CEP57L1Q8IYX8 460 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 ZNF295-AS1Q8N0V1 137 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 TSEN2Q8NCE0 465 aaKnown RBP7.57□□□□□ -1.2
PDCD4-207ENST00000483595 CCDC148Q8NFR7 591 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 SLC16A10Q8TF71 515 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 STK32AQ8WU08 396 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 NUP133Q8WUM0 1156 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 PHKBQ93100 1093 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 FERMT2Q96AC1 680 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 POLLQ9UGP5 575 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
PDCD4-207ENST00000483595 C10orf71Q711Q0 1435 aa7.57□□□□□ -1.2
PDCD4-207ENST00000483595 MYH15Q9Y2K3 1946 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 SMTNL1A8MU46 457 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 GOLGA6L19H0YKK7 550 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 ATG7O95352 703 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 PTMAP06454 111 aaKnown RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 MMP10P09238 476 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 TOP1P11387 765 aaKnown RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 SCG2P13521 617 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 RHOQP17081 205 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 CDC25BP30305 580 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 KRT2P35908 639 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 BTDP43251 543 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 NOVP48745 357 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 ZNF165P49910 485 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 SMTNP53814 917 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 TFAP4Q01664 338 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 GRM4Q14833 912 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 PTPAQ15257 358 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 MTFR1Q15390 333 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 PFKFB3Q16875 520 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 AXDND1Q5T1B0 1012 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 STRIP1Q5VSL9 837 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 RESP18Q5W5W9 173 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 SARM1Q6SZW1 724 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 SMIM5Q71RC9 77 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 PRICKLE2Q7Z3G6 844 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 SH3RF3Q8TEJ3 882 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 ZNF775Q96BV0 537 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 CCDC17Q96LX7 622 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 PHF20Q9BVI0 1012 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 GTPBP4Q9BZE4 634 aaKnown RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 DHX36Q9H2U1 1008 aaKnown RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 STK32BQ9NY57 414 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 HPSEQ9Y251 543 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 SRPRBQ9Y5M8 271 aaKnown RBP7.56□□□□□ -1.2
PDCD4-207ENST00000483595 CLIC4Q9Y696 253 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 TACC3Q9Y6A5 838 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 MRVI1Q9Y6F6 885 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 COL4A1P02462 1669 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 PLIN4Q96Q06 1357 aa7.56□□□□□ -1.2
PDCD4-207ENST00000483595 WTIPA6NIX2 430 aaPredicted RBP7.55□□□□□ -1.2
PDCD4-207ENST00000483595 LAD1O00515 517 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 ZNF500O60304 480 aaPredicted RBP7.55□□□□□ -1.2
PDCD4-207ENST00000483595 NEMFO60524 1076 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 LGR5O75473 907 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 ZNF202O95125 648 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 ADCY5O95622 1261 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 HOXA7P31268 230 aaPredicted RBP7.55□□□□□ -1.2
PDCD4-207ENST00000483595 SYKP43405 635 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 RHBDL3P58872 404 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 FOXK2Q01167 660 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 CEBPZQ03701 1054 aaKnown RBP7.55□□□□□ -1.2
PDCD4-207ENST00000483595 KIAA2012Q0VF49 1180 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.55□□□□□ -1.2
PDCD4-207ENST00000483595 SOGA3Q5TF21 947 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 ARL6IP4Q66PJ3 421 aaKnown RBP7.55□□□□□ -1.2
PDCD4-207ENST00000483595 MCTP2Q6DN12 878 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 RCSD1Q6JBY9 416 aa7.55□□□□□ -1.2
PDCD4-207ENST00000483595 LYSMD3Q7Z3D4 306 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms