RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 MDM2Q00987 491 aaPredicted RBP27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 C1orf53Q5VUE5 145 aa27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 CREB3L3Q68CJ9 461 aa27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 HOMER1Q86YM7 354 aa27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 MORC4Q8TE76 937 aa27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 GLT1D1Q96MS3 346 aa27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 AMNQ9BXJ7 453 aa27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 UBE2OQ9C0C9 1292 aaKnown RBP27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 AP5M1Q9H0R1 490 aa27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 PDGFCQ9NRA1 345 aa27.37■■□□□ 1.97
RHBDF1-208ENST00000482904 PALM3A6NDB9 673 aaPredicted RBP27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 B4DLN1 442 aa27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 PRC1O43663 620 aa27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 MCM5P33992 734 aa27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 MRPL12P52815 198 aaKnown RBP27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 IRX5P78411 483 aaPredicted RBP27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 GNASQ5JWF2 1037 aa27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 RNF20Q5VTR2 975 aa27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 RGS22Q8NE09 1264 aa27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 DNERQ8NFT8 737 aa27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 TRIOBPQ9H2D6 2365 aa27.36■■□□□ 1.97
RHBDF1-208ENST00000482904 PQBP1O60828 265 aaKnown RBP27.35■■□□□ 1.97
RHBDF1-208ENST00000482904 ASGR1P07306 291 aa27.35■■□□□ 1.97
RHBDF1-208ENST00000482904 SMPD1P17405 629 aa27.35■■□□□ 1.97
RHBDF1-208ENST00000482904 BMP8BP34820 402 aa27.35■■□□□ 1.97
RHBDF1-208ENST00000482904 IQSEC1Q6DN90 963 aa27.35■■□□□ 1.97
RHBDF1-208ENST00000482904 NFXL1Q6ZNB6 911 aa27.35■■□□□ 1.97
RHBDF1-208ENST00000482904 VTI1AQ96AJ9 217 aa27.35■■□□□ 1.97
RHBDF1-208ENST00000482904 ZBTB5O15062 677 aa27.34■■□□□ 1.97
RHBDF1-208ENST00000482904 TLE2Q04725 743 aa27.34■■□□□ 1.97
RHBDF1-208ENST00000482904 CCSAPQ6IQ19 270 aaPredicted RBP27.34■■□□□ 1.97
RHBDF1-208ENST00000482904 TAPT1Q6NXT6 567 aa27.34■■□□□ 1.97
RHBDF1-208ENST00000482904 IGDCC4Q8TDY8 1250 aa27.34■■□□□ 1.97
RHBDF1-208ENST00000482904 PDLIM7Q9NR12 457 aa27.34■■□□□ 1.97
RHBDF1-208ENST00000482904 GNEQ9Y223 722 aaKnown RBP27.34■■□□□ 1.97
RHBDF1-208ENST00000482904 DDAH1O94760 285 aa27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 BEX3Q00994 111 aa27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 TROAPQ12815 778 aa27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 NECTIN1Q15223 517 aa27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 ZNF654Q8IZM8 581 aa27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 CTCFLQ8NI51 663 aaPredicted RBP27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 MTA3Q9BTC8 594 aa27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 MAF1Q9H063 256 aa27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 LY9Q9HBG7 655 aa27.33■■□□□ 1.97
RHBDF1-208ENST00000482904 CCDC69A6NI79 296 aa27.32■■□□□ 1.96
RHBDF1-208ENST00000482904 DYNC1LI2O43237 492 aaPredicted RBP27.32■■□□□ 1.96
RHBDF1-208ENST00000482904 FSCN1Q16658 493 aaKnown RBP27.32■■□□□ 1.96
RHBDF1-208ENST00000482904 TMEM87BQ96K49 555 aa27.32■■□□□ 1.96
RHBDF1-208ENST00000482904 SH2B2O14492 632 aaPredicted RBP27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 ZEB2O60315 1214 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 CFBP00751 764 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 CLTBP09497 229 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 PTGS1P23219 599 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 TRAF1Q13077 416 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 TDHQ8IZJ6 230 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 SYTL5Q8TDW5 730 aaPredicted RBP27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 MTMR8Q96EF0 704 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 PIGSQ96S52 555 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 MYL10Q9BUA6 226 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 WDR11Q9BZH6 1224 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 GPHNQ9NQX3 736 aaPredicted RBP27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 PCDHA1Q9Y5I3 950 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 ELP1O95163 1332 aa27.31■■□□□ 1.96
RHBDF1-208ENST00000482904 EDNRBP24530 442 aa27.3■■□□□ 1.96
RHBDF1-208ENST00000482904 KIF5BP33176 963 aa27.3■■□□□ 1.96
RHBDF1-208ENST00000482904 PPP2R5BQ15173 497 aa27.3■■□□□ 1.96
RHBDF1-208ENST00000482904 DUSP28Q4G0W2 176 aa27.3■■□□□ 1.96
RHBDF1-208ENST00000482904 NSUN6Q8TEA1 469 aaKnown RBP27.3■■□□□ 1.96
RHBDF1-208ENST00000482904 TBC1D5Q92609 795 aa27.3■■□□□ 1.96
RHBDF1-208ENST00000482904 Q9Y3F1 56 aa27.3■■□□□ 1.96
RHBDF1-208ENST00000482904 A0A0U1RQG5 324 aaPredicted RBP27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 DCDC2CA8MYV0 355 aa27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 CTAGE5O15320 804 aa27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 PPP1R11O60927 126 aaPredicted RBP27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 SCFD2Q8WU76 684 aa27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 PIBF1Q8WXW3 757 aa27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 RMDN3Q96TC7 470 aa27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 RIOX1Q9H6W3 641 aa27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 COL20A1Q9P218 1284 aa27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 MROH7Q68CQ1 1323 aa27.29■■□□□ 1.96
RHBDF1-208ENST00000482904 NKX3-2P78367 333 aa27.28■■□□□ 1.96
RHBDF1-208ENST00000482904 TMEM63BQ5T3F8 832 aa27.28■■□□□ 1.96
RHBDF1-208ENST00000482904 ARHGEF16Q5VV41 709 aa27.28■■□□□ 1.96
RHBDF1-208ENST00000482904 CXCL17Q6UXB2 119 aa27.28■■□□□ 1.96
RHBDF1-208ENST00000482904 SH3RF1Q7Z6J0 888 aa27.28■■□□□ 1.96
RHBDF1-208ENST00000482904 TMTC2Q8N394 836 aa27.28■■□□□ 1.96
RHBDF1-208ENST00000482904 TAAR1Q96RJ0 339 aa27.28■■□□□ 1.96
RHBDF1-208ENST00000482904 SLC35G1Q2M3R5 365 aa27.27■■□□□ 1.96
RHBDF1-208ENST00000482904 ANKRD33Q7Z3H0 272 aa27.27■■□□□ 1.96
RHBDF1-208ENST00000482904 OR6J1Q8NGC5 347 aa27.27■■□□□ 1.96
RHBDF1-208ENST00000482904 MAP3K14Q99558 947 aa27.27■■□□□ 1.96
RHBDF1-208ENST00000482904 LRRC2Q9BYS8 371 aa27.27■■□□□ 1.96
RHBDF1-208ENST00000482904 TMEM39AQ9NV64 488 aa27.27■■□□□ 1.96
RHBDF1-208ENST00000482904 MYH6P13533 1939 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 PNMA6FA0A0J9YX94 578 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 RBM47A0AV96 593 aaKnown RBP27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 TRIM43BA6NCK2 446 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 CYTH3O43739 400 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 CABYRO75952 493 aa27.26■■□□□ 1.95
RHBDF1-208ENST00000482904 EIF2AK2P19525 551 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms