RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 Q6ZUG5 572 aa21.3■■□□□ 1
SMIM4-204ENST00000482728 DPF3Q92784 378 aa21.3■■□□□ 1
SMIM4-204ENST00000482728 SEC63Q9UGP8 760 aaKnown RBP21.3■■□□□ 1
SMIM4-204ENST00000482728 MCM3APO60318 1980 aa21.29■■□□□ 1
SMIM4-204ENST00000482728 LOC102724159A0A0B4J2E5 919 aa21.29■■□□□ 1
SMIM4-204ENST00000482728 KLF18A0A0U1RQI7 1052 aa21.29■■□□□ 1
SMIM4-204ENST00000482728 PPP1R11O60927 126 aaPredicted RBP21.29■■□□□ 1
SMIM4-204ENST00000482728 PWP2Q15269 919 aaKnown RBP21.29■■□□□ 1
SMIM4-204ENST00000482728 SRBD1Q8N5C6 995 aaKnown RBP21.29■■□□□ 1
SMIM4-204ENST00000482728 DIS3LQ8TF46 1054 aaKnown RBP21.29■■□□□ 1
SMIM4-204ENST00000482728 TBC1D5Q92609 795 aa21.29■■□□□ 1
SMIM4-204ENST00000482728 C11orf49Q9H6J7 331 aa21.29■■□□□ 1
SMIM4-204ENST00000482728 BRPF3Q9ULD4 1205 aa21.29■■□□□ 1
SMIM4-204ENST00000482728 CYP46A1Q9Y6A2 500 aa21.29■■□□□ 1
SMIM4-204ENST00000482728 PLEKHA8P1O95397 391 aa21.28■■□□□ 1
SMIM4-204ENST00000482728 CFBP00751 764 aa21.28■■□□□ 1
SMIM4-204ENST00000482728 ALDH5A1P51649 535 aaPredicted RBP21.28■■□□□ 1
SMIM4-204ENST00000482728 RTN1Q16799 776 aa21.28■■□□□ 1
SMIM4-204ENST00000482728 CCDC144BQ3MJ40 725 aa21.28■■□□□ 1
SMIM4-204ENST00000482728 CMTR1Q8N1G2 835 aaKnown RBP21.28■■□□□ 1
SMIM4-204ENST00000482728 CCDC82Q8N4S0 544 aa21.28■■□□□ 1
SMIM4-204ENST00000482728 DNERQ8NFT8 737 aa21.28■■□□□ 1
SMIM4-204ENST00000482728 XPNPEP3Q9NQH7 507 aa21.28■■□□□ 1
SMIM4-204ENST00000482728 RBM28Q9NW13 759 aaKnown RBP21.28■■□□□ 1
SMIM4-204ENST00000482728 MNX1P50219 401 aaPredicted RBP21.27■■□□□ 1
SMIM4-204ENST00000482728 PDE4DQ08499 809 aa21.27■■□□□ 1
SMIM4-204ENST00000482728 GJC2Q5T442 439 aaPredicted RBP21.27■■□□□ 1
SMIM4-204ENST00000482728 NOL8Q76FK4 1167 aaKnown RBP21.27■■□□□ 1
SMIM4-204ENST00000482728 RUFY3Q7L099 469 aa21.27■■□□□ 1
SMIM4-204ENST00000482728 EEPD1Q7L9B9 569 aa21.27■■□□□ 1
SMIM4-204ENST00000482728 SYTL5Q8TDW5 730 aaPredicted RBP21.27■■□□□ 1
SMIM4-204ENST00000482728 BRF1Q92994 677 aa21.27■■□□□ 1
SMIM4-204ENST00000482728 ZSWIM6Q9HCJ5 1215 aa21.27■■□□□ 1
SMIM4-204ENST00000482728 ASTN1O14525 1302 aa21.27■□□□□ 0.99
SMIM4-204ENST00000482728 CEP290O15078 2479 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 GOLGA8AA7E2F4 631 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 GOLGA8BA8MQT2 603 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 KBTBD13C9JR72 458 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 DNM1LO00429 736 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 APOBRQ0VD83 1088 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 TMTC3Q6ZXV5 915 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 RNF180Q86T96 592 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 MORC4Q8TE76 937 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 NSUN6Q8TEA1 469 aaKnown RBP21.26■□□□□ 0.99
SMIM4-204ENST00000482728 TM6SF1Q9BZW5 370 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 VTA1Q9NP79 307 aa21.26■□□□□ 0.99
SMIM4-204ENST00000482728 MAP3K20Q9NYL2 800 aaKnown RBP21.26■□□□□ 0.99
SMIM4-204ENST00000482728 DDX49Q9Y6V7 483 aaKnown RBP21.26■□□□□ 0.99
SMIM4-204ENST00000482728 CCDC196A0A1B0GTZ2 297 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 DUSP11O75319 330 aaKnown RBP21.25■□□□□ 0.99
SMIM4-204ENST00000482728 PGK1P00558 417 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 RCAN1P53805 252 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 TNFAIP2Q03169 654 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 PPP2R5BQ15173 497 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 IQSEC1Q6DN90 963 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 FBXL16Q8N461 479 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 SAMD3Q8N6K7 520 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 TAAR1Q96RJ0 339 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 RMDN3Q96TC7 470 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 SENP6Q9GZR1 1112 aaPredicted RBP21.25■□□□□ 0.99
SMIM4-204ENST00000482728 KATNBL1Q9H079 304 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 SPC25Q9HBM1 224 aa21.25■□□□□ 0.99
SMIM4-204ENST00000482728 MKI67P46013 3256 aaKnown RBP21.25■□□□□ 0.99
SMIM4-204ENST00000482728 TNRC18O15417 2968 aaPredicted RBP21.24■□□□□ 0.99
SMIM4-204ENST00000482728 GCOM1H8Y6P7 765 aaPredicted RBP21.24■□□□□ 0.99
SMIM4-204ENST00000482728 POLR2MP0CAP2 368 aa21.24■□□□□ 0.99
SMIM4-204ENST00000482728 LRRC41Q15345 812 aa21.24■□□□□ 0.99
SMIM4-204ENST00000482728 ARHGEF16Q5VV41 709 aa21.24■□□□□ 0.99
SMIM4-204ENST00000482728 FBXO16Q8IX29 292 aaPredicted RBP21.24■□□□□ 0.99
SMIM4-204ENST00000482728 LENG1Q96BZ8 264 aaPredicted RBP21.24■□□□□ 0.99
SMIM4-204ENST00000482728 NR2E3Q9Y5X4 410 aa21.24■□□□□ 0.99
SMIM4-204ENST00000482728 OPLAHO14841 1288 aa21.23■□□□□ 0.99
SMIM4-204ENST00000482728 EVI5O60447 810 aa21.23■□□□□ 0.99
SMIM4-204ENST00000482728 COL6A1P12109 1028 aa21.23■□□□□ 0.99
SMIM4-204ENST00000482728 HOXA13P31271 388 aaPredicted RBP21.23■□□□□ 0.99
SMIM4-204ENST00000482728 ADCYAP1R1P41586 468 aa21.23■□□□□ 0.99
SMIM4-204ENST00000482728 METAP2P50579 478 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMIM4-204ENST00000482728 HSD17B4P51659 736 aa21.23■□□□□ 0.99
SMIM4-204ENST00000482728 IWS1Q96ST2 819 aa21.23■□□□□ 0.99
SMIM4-204ENST00000482728 UPF3BQ9BZI7 483 aaKnown RBP21.23■□□□□ 0.99
SMIM4-204ENST00000482728 PDGFCQ9NRA1 345 aa21.23■□□□□ 0.99
SMIM4-204ENST00000482728 COL20A1Q9P218 1284 aa21.23■□□□□ 0.99
SMIM4-204ENST00000482728 hCG_1642624A0A1W2PR95 340 aa21.22■□□□□ 0.99
SMIM4-204ENST00000482728 ANAPC15P60006 121 aa21.22■□□□□ 0.99
SMIM4-204ENST00000482728 TAPT1Q6NXT6 567 aa21.22■□□□□ 0.99
SMIM4-204ENST00000482728 AGXT2Q9BYV1 514 aa21.22■□□□□ 0.99
SMIM4-204ENST00000482728 AP5M1Q9H0R1 490 aa21.22■□□□□ 0.99
SMIM4-204ENST00000482728 C6orf222P0C671 652 aaPredicted RBP21.21■□□□□ 0.99
SMIM4-204ENST00000482728 EDNRBP24530 442 aa21.21■□□□□ 0.99
SMIM4-204ENST00000482728 GHRHRQ02643 423 aa21.21■□□□□ 0.99
SMIM4-204ENST00000482728 FCHSD1Q86WN1 690 aa21.21■□□□□ 0.99
SMIM4-204ENST00000482728 CUL5Q93034 780 aa21.21■□□□□ 0.99
SMIM4-204ENST00000482728 PDRG1Q9NUG6 133 aa21.21■□□□□ 0.99
SMIM4-204ENST00000482728 V9GY48 417 aaPredicted RBP21.21■□□□□ 0.99
SMIM4-204ENST00000482728 SYNRGQ9UMZ2 1314 aa21.21■□□□□ 0.99
SMIM4-204ENST00000482728 LCTP09848 1927 aa21.2■□□□□ 0.98
SMIM4-204ENST00000482728 EIF2AK2P19525 551 aaKnown RBP21.2■□□□□ 0.98
SMIM4-204ENST00000482728 CDC27P30260 824 aa21.2■□□□□ 0.98
SMIM4-204ENST00000482728 ADD1P35611 737 aaKnown RBP21.2■□□□□ 0.98
SMIM4-204ENST00000482728 STXBP2Q15833 593 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms