RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ZNF697Q5TEC3 545 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 PNMA1Q8ND90 353 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 ZSCAN10Q96SZ4 725 aaPredicted RBP15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 SEZ6LQ9BYH1 1024 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 CNNM2Q9H8M5 875 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 ZSWIM5Q9P217 1185 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 STXBP5LQ9Y2K9 1186 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 TAF6LQ9Y6J9 622 aa15.75■□□□□ 0.11
CTDSP1-208ENST00000482272 WDR19Q8NEZ3 1342 aa15.74■□□□□ 0.11
CTDSP1-208ENST00000482272 LAMA2P24043 3122 aaKnown RBP15.74■□□□□ 0.11
CTDSP1-208ENST00000482272 FBXO16Q8IX29 292 aaPredicted RBP15.74■□□□□ 0.11
CTDSP1-208ENST00000482272 RUFY2Q8WXA3 655 aa15.74■□□□□ 0.11
CTDSP1-208ENST00000482272 CLEC4DQ8WXI8 215 aa15.74■□□□□ 0.11
CTDSP1-208ENST00000482272 UBA5Q9GZZ9 404 aa15.74■□□□□ 0.11
CTDSP1-208ENST00000482272 RPS6P62753 249 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 SMAD3P84022 425 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 DUSP28Q4G0W2 176 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 MFSD5Q6N075 450 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 CXCL17Q6UXB2 119 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 SLC30A10Q6XR72 485 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 RGS22Q8NE09 1264 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 DNERQ8NFT8 737 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 RNPC3Q96LT9 517 aaKnown RBP15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 UBAC1Q9BSL1 405 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 MAF1Q9H063 256 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 TBX21Q9UL17 535 aa15.73■□□□□ 0.11
CTDSP1-208ENST00000482272 PARP1P09874 1014 aaKnown RBP15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 PTH1RQ03431 593 aa15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 PDE4DQ08499 809 aa15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 ITGA7Q13683 1181 aa15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 USH1GQ495M9 461 aa15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 ASPRV1Q53RT3 343 aa15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 FAM126BQ8IXS8 530 aa15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 TMEM199Q8N511 208 aa15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 ENAHQ8N8S7 591 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 WDR11Q9BZH6 1224 aa15.72■□□□□ 0.11
CTDSP1-208ENST00000482272 TNKSO95271 1327 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 COL6A3P12111 3177 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 RBM47A0AV96 593 aaKnown RBP15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 DHX16O60231 1041 aaKnown RBP15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 EPHB4P54760 987 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 TRDNQ13061 729 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 PPIGQ13427 754 aaKnown RBP eCLIP15.71■□□□□ 0.115e-8■■■□□ 16.4
CTDSP1-208ENST00000482272 BRDTQ58F21 947 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 CYB5R4Q7L1T6 521 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 SKAP1Q86WV1 359 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 ADGRF4Q8IZF3 695 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 SLC43A3Q8NBI5 491 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 FAM161BQ96MY7 647 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 POLR3EQ9NVU0 708 aa15.71■□□□□ 0.11
CTDSP1-208ENST00000482272 ABCB11O95342 1321 aa15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 RAD50Q92878 1312 aa15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 NKRFO15226 690 aaKnown RBP eCLIP15.7■□□□□ 0.12e-12■□□□□ 8.9
CTDSP1-208ENST00000482272 CD4P01730 458 aa15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 CHMLP26374 656 aa15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 CPT1AP50416 773 aa15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 CDC37Q16543 378 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 MCF2L2Q86YR7 1114 aa15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 SEMA6BQ9H3T3 888 aa15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 VAT1LQ9HCJ6 419 aa15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 GPHNQ9NQX3 736 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-208ENST00000482272 MYH6P13533 1939 aa15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 COL9A3Q14050 684 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 SLC35G1Q2M3R5 365 aa15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 SCFD2Q8WU76 684 aa15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 PPP1R12CQ9BZL4 782 aa15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 SENP2Q9HC62 589 aa15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 MRPL11Q9Y3B7 192 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 U3KPZ7 1027 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-208ENST00000482272 TXNP10599 105 aaKnown RBP15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 CSF2RAP15509 400 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 EDNRBP24530 442 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 PSMC6P62333 389 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 PPP2R5BQ15173 497 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 SEC23AQ15436 765 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 QRICH1Q2TAL8 776 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 STOX1Q6ZVD7 989 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 FBXO11Q86XK2 927 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 STAG2Q8N3U4 1231 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 OR6J1Q8NGC5 347 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 NSUN6Q8TEA1 469 aaKnown RBP15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 GUCD1Q96NT3 240 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.68■□□□□ 0.15e-11■■□□□ 13.8
CTDSP1-208ENST00000482272 CDH23Q9H251 3354 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 GRIN2DO15399 1336 aa15.68■□□□□ 0.1
CTDSP1-208ENST00000482272 ERICH2A1L162 156 aa15.67■□□□□ 0.1
CTDSP1-208ENST00000482272 KPNA6O60684 536 aa15.67■□□□□ 0.1
CTDSP1-208ENST00000482272 MYL3P08590 195 aa15.67■□□□□ 0.1
CTDSP1-208ENST00000482272 CYP21A2P08686 494 aa15.67■□□□□ 0.1
CTDSP1-208ENST00000482272 TTLL4Q14679 1199 aa15.67■□□□□ 0.1
CTDSP1-208ENST00000482272 HIPK3Q9H422 1215 aa15.67■□□□□ 0.1
CTDSP1-208ENST00000482272 JMJD4Q9H9V9 463 aa15.67■□□□□ 0.1
CTDSP1-208ENST00000482272 COL20A1Q9P218 1284 aa15.67■□□□□ 0.1
CTDSP1-208ENST00000482272 TMEM265A0A087WTH1 108 aa15.66■□□□□ 0.1
CTDSP1-208ENST00000482272 KLRF2D3W0D1 207 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms