RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 TEX2Q8IWB9 1127 aa18.9■□□□□ 0.62
CCDC78-212ENST00000482152 CCDC144CPQ8IYA2 1237 aa18.9■□□□□ 0.62
CCDC78-212ENST00000482152 FAM184BQ9ULE4 1060 aa18.9■□□□□ 0.62
CCDC78-212ENST00000482152 GOLGA8AA7E2F4 631 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 GOLGA8BA8MQT2 603 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 PPP1R11O60927 126 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-212ENST00000482152 PLEKHA8P1O95397 391 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 ZNF865P0CJ78 1059 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-212ENST00000482152 CALML3P27482 149 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 METAP2P50579 478 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC78-212ENST00000482152 APOBRQ0VD83 1088 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 C8orf34Q49A92 452 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 PRAMEF19Q5SWL8 479 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 ARRDC4Q8NCT1 418 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 SHISA4Q96DD7 197 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 ZNF274Q96GC6 653 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-212ENST00000482152 PDRG1Q9NUG6 133 aa18.89■□□□□ 0.61
CCDC78-212ENST00000482152 ALDH5A1P51649 535 aaPredicted RBP18.88■□□□□ 0.61
CCDC78-212ENST00000482152 HSD17B4P51659 736 aa18.88■□□□□ 0.61
CCDC78-212ENST00000482152 ANKRD1Q15327 319 aa18.88■□□□□ 0.61
CCDC78-212ENST00000482152 SLC30A10Q6XR72 485 aa18.88■□□□□ 0.61
CCDC78-212ENST00000482152 UBE2Q1Q7Z7E8 422 aa18.88■□□□□ 0.61
CCDC78-212ENST00000482152 NSUN6Q8TEA1 469 aaKnown RBP18.88■□□□□ 0.61
CCDC78-212ENST00000482152 IWS1Q96ST2 819 aa18.88■□□□□ 0.61
CCDC78-212ENST00000482152 RBM27Q9P2N5 1060 aaKnown RBP18.88■□□□□ 0.61
CCDC78-212ENST00000482152 NAP1L2Q9ULW6 460 aaPredicted RBP18.88■□□□□ 0.61
CCDC78-212ENST00000482152 NID2Q14112 1375 aa18.88■□□□□ 0.61
CCDC78-212ENST00000482152 GCOM1H8Y6P7 765 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-212ENST00000482152 FARP2O94887 1054 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-212ENST00000482152 SEC24BO95487 1268 aa18.87■□□□□ 0.61
CCDC78-212ENST00000482152 CFBP00751 764 aa18.87■□□□□ 0.61
CCDC78-212ENST00000482152 POLR2MP0CAP2 368 aa18.87■□□□□ 0.61
CCDC78-212ENST00000482152 RARBP10826 455 aa18.87■□□□□ 0.61
CCDC78-212ENST00000482152 TAL1P17542 331 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-212ENST00000482152 SYTL5Q8TDW5 730 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-212ENST00000482152 VTA1Q9NP79 307 aa18.87■□□□□ 0.61
CCDC78-212ENST00000482152 FAM217BQ9NTX9 383 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-212ENST00000482152 PLXNA1Q9UIW2 1896 aa18.87■□□□□ 0.61
CCDC78-212ENST00000482152 hCG_1984214I3L0E3 225 aa18.86■□□□□ 0.61
CCDC78-212ENST00000482152 EDNRBP24530 442 aa18.86■□□□□ 0.61
CCDC78-212ENST00000482152 PDIA3P30101 505 aaKnown RBP18.86■□□□□ 0.61
CCDC78-212ENST00000482152 FUT2Q10981 343 aa18.86■□□□□ 0.61
CCDC78-212ENST00000482152 TOB2Q14106 344 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-212ENST00000482152 IQSEC1Q6DN90 963 aa18.86■□□□□ 0.61
CCDC78-212ENST00000482152 NECAB2Q7Z6G3 386 aa18.86■□□□□ 0.61
CCDC78-212ENST00000482152 RAB11FIP4Q86YS3 637 aa18.86■□□□□ 0.61
CCDC78-212ENST00000482152 CCDC82Q8N4S0 544 aa18.86■□□□□ 0.61
CCDC78-212ENST00000482152 ZNF713Q8N859 430 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-212ENST00000482152 IL27Q8NEV9 243 aa18.86■□□□□ 0.61
CCDC78-212ENST00000482152 UPF3BQ9BZI7 483 aaKnown RBP18.86■□□□□ 0.61
CCDC78-212ENST00000482152 ZHX1Q9UKY1 873 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-212ENST00000482152 ASTN1O14525 1302 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 OPLAHO14841 1288 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 DUSP11O75319 330 aaKnown RBP18.85■□□□□ 0.61
CCDC78-212ENST00000482152 ADD1P35611 737 aaKnown RBP18.85■□□□□ 0.61
CCDC78-212ENST00000482152 PDE4DQ08499 809 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 CMTR1Q8N1G2 835 aaKnown RBP18.85■□□□□ 0.61
CCDC78-212ENST00000482152 TBC1D5Q92609 795 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 CUL5Q93034 780 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 RMDN3Q96TC7 470 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 HTATIP2Q9BUP3 242 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 KATNBL1Q9H079 304 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
CCDC78-212ENST00000482152 KIAA0100Q14667 2235 aaKnown RBP18.85■□□□□ 0.61
CCDC78-212ENST00000482152 PIK3CDO00329 1044 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 DNM1LO00429 736 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 CDC27P30260 824 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 CCDC144BQ3MJ40 725 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 ARHGEF16Q5VV41 709 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 PIBF1Q8WXW3 757 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 PURBQ96QR8 312 aaKnown RBP18.84■□□□□ 0.61
CCDC78-212ENST00000482152 TAAR1Q96RJ0 339 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 GLT8D2Q9H1C3 349 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 UPF2Q9HAU5 1272 aaKnown RBP18.84■□□□□ 0.61
CCDC78-212ENST00000482152 SPC25Q9HBM1 224 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 XPNPEP3Q9NQH7 507 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 Q9Y3F1 56 aa18.84■□□□□ 0.61
CCDC78-212ENST00000482152 V9GY48 417 aaPredicted RBP18.84■□□□□ 0.61
CCDC78-212ENST00000482152 CNTNAP5Q8WYK1 1306 aa18.83■□□□□ 0.61
CCDC78-212ENST00000482152 STXBP2Q15833 593 aa18.83■□□□□ 0.6
CCDC78-212ENST00000482152 PPP1R18Q6NYC8 613 aa18.83■□□□□ 0.6
CCDC78-212ENST00000482152 CPLX2Q6PUV4 134 aaKnown RBP18.83■□□□□ 0.6
CCDC78-212ENST00000482152 RNF180Q86T96 592 aa18.83■□□□□ 0.6
CCDC78-212ENST00000482152 PSTPIP2Q9H939 334 aa18.83■□□□□ 0.6
CCDC78-212ENST00000482152 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
CCDC78-212ENST00000482152 PRPF3O43395 683 aaKnown RBP18.82■□□□□ 0.6
CCDC78-212ENST00000482152 IFNAR1P17181 557 aa18.82■□□□□ 0.6
CCDC78-212ENST00000482152 NKX3-2P78367 333 aa18.82■□□□□ 0.6
CCDC78-212ENST00000482152 AKAP17AQ02040 695 aaKnown RBP18.82■□□□□ 0.6
CCDC78-212ENST00000482152 TNFAIP2Q03169 654 aa18.82■□□□□ 0.6
CCDC78-212ENST00000482152 TAPT1Q6NXT6 567 aa18.82■□□□□ 0.6
CCDC78-212ENST00000482152 PAWRQ96IZ0 340 aaKnown RBP18.82■□□□□ 0.6
CCDC78-212ENST00000482152 TSEN34Q9BSV6 310 aaKnown RBP18.82■□□□□ 0.6
CCDC78-212ENST00000482152 C11orf49Q9H6J7 331 aa18.82■□□□□ 0.6
CCDC78-212ENST00000482152 PXMP2Q9NR77 195 aa18.82■□□□□ 0.6
CCDC78-212ENST00000482152 SMCHD1A6NHR9 2005 aa18.82■□□□□ 0.6
CCDC78-212ENST00000482152 KBTBD13C9JR72 458 aa18.81■□□□□ 0.6
CCDC78-212ENST00000482152 NKRFO15226 690 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCDC78-212ENST00000482152 EIF3JO75822 258 aaKnown RBP18.81■□□□□ 0.6
CCDC78-212ENST00000482152 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms