RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 TRMT1Q9NXH9 659 aaKnown RBP18.9■□□□□ 0.62
SH3D21-203ENST00000480549 IMPACTQ9P2X3 320 aa18.9■□□□□ 0.62
SH3D21-203ENST00000480549 RRP15Q9Y3B9 282 aaKnown RBP18.9■□□□□ 0.62
SH3D21-203ENST00000480549 CEP83Q9Y592 693 aa18.9■□□□□ 0.62
SH3D21-203ENST00000480549 USP17L10C9JJH3 530 aa18.89■□□□□ 0.62
SH3D21-203ENST00000480549 PSMD14O00487 310 aa18.89■□□□□ 0.62
SH3D21-203ENST00000480549 EDIL3O43854 480 aa18.89■□□□□ 0.62
SH3D21-203ENST00000480549 DISC1Q9NRI5 854 aa18.89■□□□□ 0.62
SH3D21-203ENST00000480549 RAD17O75943 681 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 CD44P16070 742 aaKnown RBP18.89■□□□□ 0.61
SH3D21-203ENST00000480549 ZNF18P17022 549 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 JAG1P78504 1218 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 NAALADL2Q58DX5 795 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 TMEM179Q6ZVK1 233 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
SH3D21-203ENST00000480549 SPDYE2BA6NHP3 402 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 ZBTB5O15062 677 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 OR52Z1P0C646 297 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 SPDYE6P0CI01 402 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 ERCC5P28715 1186 aaPredicted RBP18.89■□□□□ 0.61
SH3D21-203ENST00000480549 TXLNAP40222 546 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 TRMT44Q8IYL2 757 aaKnown RBP18.89■□□□□ 0.61
SH3D21-203ENST00000480549 CCSER1Q9C0I3 900 aa18.89■□□□□ 0.61
SH3D21-203ENST00000480549 GTPBP6O43824 516 aaPredicted RBP18.88■□□□□ 0.61
SH3D21-203ENST00000480549 GDF11O95390 407 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 CCDC172P0C7W6 258 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 ORC2Q13416 577 aaPredicted RBP18.88■□□□□ 0.61
SH3D21-203ENST00000480549 CUL4BQ13620 913 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 RRP1BQ14684 758 aaKnown RBP18.88■□□□□ 0.61
SH3D21-203ENST00000480549 SRLQ86TD4 932 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 LARGE2Q8N3Y3 721 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 DCAF4Q8WV16 495 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 BLZF1Q9H2G9 400 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 RIC8AQ9NPQ8 531 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 NEMFO60524 1076 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 CLK2P49760 499 aaKnown RBP18.88■□□□□ 0.61
SH3D21-203ENST00000480549 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 NFE2L3Q9Y4A8 694 aa18.88■□□□□ 0.61
SH3D21-203ENST00000480549 ICA1Q05084 483 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 GPS2Q13227 327 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 TMC6Q7Z403 805 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 MYH7BA7E2Y1 1941 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 BRCA1P38398 1863 aaKnown RBP18.87■□□□□ 0.61
SH3D21-203ENST00000480549 STAT6P42226 847 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 UBASH3AP57075 661 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 CCZ1BP86790 482 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 CCZ1P86791 482 aaPredicted RBP18.87■□□□□ 0.61
SH3D21-203ENST00000480549 TTC31Q49AM3 519 aaPredicted RBP18.87■□□□□ 0.61
SH3D21-203ENST00000480549 SLFN13Q68D06 897 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 PPP1R3GB7ZBB8 358 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 GSDMDP57764 484 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 LRRC15Q8TF66 581 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 CSRNP1Q96S65 589 aa18.87■□□□□ 0.61
SH3D21-203ENST00000480549 SERPINC1P01008 464 aa18.86■□□□□ 0.61
SH3D21-203ENST00000480549 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
SH3D21-203ENST00000480549 INTS13Q9NVM9 706 aa18.86■□□□□ 0.61
SH3D21-203ENST00000480549 SLC1A4P43007 532 aa18.86■□□□□ 0.61
SH3D21-203ENST00000480549 PACS2Q86VP3 889 aa18.86■□□□□ 0.61
SH3D21-203ENST00000480549 SMYD4Q8IYR2 804 aaPredicted RBP18.86■□□□□ 0.61
SH3D21-203ENST00000480549 AK8Q96MA6 479 aa18.86■□□□□ 0.61
SH3D21-203ENST00000480549 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
SH3D21-203ENST00000480549 ZBTB12Q9Y330 459 aaPredicted RBP18.86■□□□□ 0.61
SH3D21-203ENST00000480549 CBFA2T2O43439 604 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 H2AFXP16104 143 aaPredicted RBP18.85■□□□□ 0.61
SH3D21-203ENST00000480549 GMCL1P1Q8NEA9 526 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 CNTNAP1P78357 1384 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 FER1L6Q2WGJ9 1857 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 UBA7P41226 1012 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 UBE2SQ16763 222 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 ARMCX5Q6P1M9 558 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 MTMR9Q96QG7 549 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 DEF6Q9H4E7 631 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 ZNF70Q9UC06 446 aaPredicted RBP18.85■□□□□ 0.61
SH3D21-203ENST00000480549 CLRN2A0PK11 232 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 TCP10L2B9ZVM9 353 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 HSP90AA4PQ58FG1 418 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 RRAGBQ5VZM2 374 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 LRRN4CLQ8ND94 238 aa18.85■□□□□ 0.61
SH3D21-203ENST00000480549 SAMSN1Q9NSI8 373 aaKnown RBP18.85■□□□□ 0.61
SH3D21-203ENST00000480549 F5H6K3 240 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 GH2P01242 217 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 KLRC3Q07444 240 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 QRICH1Q2TAL8 776 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 CUL5Q93034 780 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 SYNRGQ9UMZ2 1314 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 TMEM232C9JQI7 657 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 SLC37A4O43826 429 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 IGSF22Q8N9C0 903 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 HERC5Q9UII4 1024 aaKnown RBP18.84■□□□□ 0.61
SH3D21-203ENST00000480549 HDAC9Q9UKV0 1011 aa18.84■□□□□ 0.61
SH3D21-203ENST00000480549 RAD21O60216 631 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 TDP2O95551 362 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 DLGAP5Q15398 846 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 SPDYE2Q495Y8 402 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 ARHGAP29Q52LW3 1261 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 RBM26Q5T8P6 1007 aaKnown RBP18.83■□□□□ 0.61
SH3D21-203ENST00000480549 VSTM4Q8IW00 320 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 GMCL1Q96IK5 515 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 KBTBD4Q9NVX7 518 aa18.83■□□□□ 0.61
SH3D21-203ENST00000480549 TMOD2Q9NZR1 351 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms