RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 FTOQ9C0B1 505 aaKnown RBP eCLIP10.29□□□□□ -0.76
NUDCD3-208ENST00000480209 EFCC1Q9HA90 598 aa10.29□□□□□ -0.76
NUDCD3-208ENST00000480209 BIN2Q9UBW5 565 aaPredicted RBP10.29□□□□□ -0.76
NUDCD3-208ENST00000480209 RABGAP1Q9Y3P9 1069 aa10.29□□□□□ -0.76
NUDCD3-208ENST00000480209 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
NUDCD3-208ENST00000480209 ASTN1O14525 1302 aa10.29□□□□□ -0.76
NUDCD3-208ENST00000480209 EDIL3O43854 480 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 CFBP00751 764 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 ERCC3P19447 782 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 HSD17B4P51659 736 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 INHBEP58166 350 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 NUCB2P80303 420 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 CAP1Q01518 475 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 NBR1Q14596 966 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 FAM110CQ1W6H9 321 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 C17orf99Q6UX52 265 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 NOSTRINQ8IVI9 506 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 FAM177A1Q8N128 213 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 REXO1Q8N1G1 1221 aaKnown RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 GTF3C2Q8WUA4 911 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 CCDC12Q8WUD4 166 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 TNPO1Q92973 898 aaKnown RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 CUL5Q93034 780 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 FOXP1Q9H334 677 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 PSTPIP2Q9H939 334 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 C6orf50Q9HD87 102 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 A1CFQ9NQ94 594 aaKnown RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 MRPL11Q9Y3B7 192 aaKnown RBP10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 CASP8AP2Q9UKL3 1982 aa10.28□□□□□ -0.76
NUDCD3-208ENST00000480209 PIK3CDO00329 1044 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 TLR2O60603 784 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 CALML3P27482 149 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 CTGFP29279 349 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 TOB1P50616 345 aaPredicted RBP10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 TKFCQ3LXA3 575 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 FOXD4L6Q3SYB3 417 aaPredicted RBP10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 FOXD4L3Q6VB84 417 aaPredicted RBP10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 PIK3AP1Q6ZUJ8 805 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 NCAPG2Q86XI2 1143 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 IL31RAQ8NI17 732 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 ACAD9Q9H845 621 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 CYP39A1Q9NYL5 469 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 FRMPD4Q14CM0 1322 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 WDR81Q562E7 1941 aa10.27□□□□□ -0.77
NUDCD3-208ENST00000480209 CA12O43570 354 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 TBC1D8O95759 1140 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 GNA11P29992 359 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 MAP2K2P36507 400 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 RPS6P62753 249 aaKnown RBP10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 BAATQ14032 418 aaPredicted RBP10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 MYSM1Q5VVJ2 828 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 GALNT17Q6IS24 598 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 NSMFQ6X4W1 530 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 FCHSD1Q86WN1 690 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 CHST13Q8NET6 341 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 GPRC5AQ8NFJ5 357 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 SYTL5Q8TDW5 730 aaPredicted RBP10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 FGD4Q96M96 766 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 ANO3Q9BYT9 981 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 ZFYVE28Q9HCC9 887 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 DDX49Q9Y6V7 483 aaKnown RBP10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 RPTORQ8N122 1335 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 PCNTO95613 3336 aa10.26□□□□□ -0.77
NUDCD3-208ENST00000480209 GCOM1H8Y6P7 765 aaPredicted RBP10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 POLR2MP0CAP2 368 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 MRPL12P52815 198 aaKnown RBP10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 UBXN2AP68543 259 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 CNTN2Q02246 1040 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 DNM1Q05193 864 aaKnown RBP10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 TRAF1Q13077 416 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 AP3B2Q13367 1082 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 INF2Q27J81 1249 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 RNF207Q6ZRF8 634 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 KRT25Q7Z3Z0 450 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 BRAPQ7Z569 592 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 SHCBP1Q8NEM2 672 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 BICD2Q8TD16 824 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 TBCKQ8TEA7 893 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 CRYGNQ8WXF5 182 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 USP28Q96RU2 1077 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 ARHGAP39Q9C0H5 1083 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 ZSCAN16Q9H4T2 348 aaPredicted RBP10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 BRMS1Q9HCU9 246 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 RNF186Q9NXI6 227 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 PNMA2Q9UL42 364 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 PCDHB6Q9Y5E3 794 aa10.25□□□□□ -0.77
NUDCD3-208ENST00000480209 DNAJC25-GNG10A0A024R161 153 aa10.24□□□□□ -0.77
NUDCD3-208ENST00000480209 TRPA1O75762 1119 aa10.24□□□□□ -0.77
NUDCD3-208ENST00000480209 TDP2O95551 362 aa10.24□□□□□ -0.77
NUDCD3-208ENST00000480209 SLC25A27O95847 323 aa10.24□□□□□ -0.77
NUDCD3-208ENST00000480209 PGK2P07205 417 aa10.24□□□□□ -0.77
NUDCD3-208ENST00000480209 PDIA4P13667 645 aaKnown RBP10.24□□□□□ -0.77
NUDCD3-208ENST00000480209 SREBF1P36956 1147 aa10.24□□□□□ -0.77
NUDCD3-208ENST00000480209 GNL2Q13823 731 aaKnown RBP10.24□□□□□ -0.77
NUDCD3-208ENST00000480209 NONOQ15233 471 aaKnown RBP eCLIP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms