RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 DIS3L2Q8IYB7 885 aaKnown RBP14.39□□□□□ -0.11
TRAPPC12-218ENST00000479897 ABRAQ8N0Z2 381 aa14.39□□□□□ -0.11
TRAPPC12-218ENST00000479897 REXO1Q8N1G1 1221 aaKnown RBP14.39□□□□□ -0.11
TRAPPC12-218ENST00000479897 TNFRSF25Q93038 417 aa14.39□□□□□ -0.11
TRAPPC12-218ENST00000479897 FOXP1Q9H334 677 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC12-218ENST00000479897 A1CFQ9NQ94 594 aaKnown RBP14.39□□□□□ -0.11
TRAPPC12-218ENST00000479897 HOMER2Q9NSB8 354 aa14.39□□□□□ -0.11
TRAPPC12-218ENST00000479897 FRMPD4Q14CM0 1322 aa14.39□□□□□ -0.11
TRAPPC12-218ENST00000479897 ZSWIM8A7E2V4 1837 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 DOCK3Q8IZD9 2030 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 VPS37CA5D8V6 355 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 GCOM1H8Y6P7 765 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 STRNO43815 780 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 POLR2MP0CAP2 368 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 FOSBP53539 338 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 NUCB2P80303 420 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 R3HDMLQ9H3Y0 253 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 EFCC1Q9HA90 598 aa14.38□□□□□ -0.11
TRAPPC12-218ENST00000479897 TRPA1O75762 1119 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 CFBP00751 764 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 FOSP01100 380 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 ZSCAN22P10073 491 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 RPS6P62753 249 aaKnown RBP14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 RNF207Q6ZRF8 634 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 KRT25Q7Z3Z0 450 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 BRAPQ7Z569 592 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 GPR142Q7Z601 462 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 JMYQ8N9B5 988 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 OXER1Q8TDS5 423 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 WBP1LQ9NX94 342 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 CYP39A1Q9NYL5 469 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 PCDHA6Q9UN73 950 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 PCDHA8Q9Y5H6 950 aa14.37□□□□□ -0.11
TRAPPC12-218ENST00000479897 DNAJC25-GNG10A0A024R161 153 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 BTBD18B2RXH4 712 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 KIF28PB7ZC32 967 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 ADAMTS3O15072 1205 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 FCER1AP12319 257 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 LACTBP83111 547 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 RESTQ13127 1097 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 NR5A1Q13285 461 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 PKP1Q13835 747 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 GRB14Q14449 540 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 KCTD2Q14681 263 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 UBE2SQ16763 222 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 USP17L6PQ6QN14 398 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 NSMFQ6X4W1 530 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 SLC30A10Q6XR72 485 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 PLEKHH3Q7Z736 793 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 NOSTRINQ8IVI9 506 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 SYTL5Q8TDW5 730 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 ZSCAN16Q9H4T2 348 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 ZDHHC9Q9Y397 364 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 IVNS1ABPQ9Y6Y0 642 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 RPTORQ8N122 1335 aa14.36□□□□□ -0.11
TRAPPC12-218ENST00000479897 LOC102724159A0A0B4J2E5 919 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 SLC15A5A6NIM6 579 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 GPR25O00155 361 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 TBC1D8O95759 1140 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 F13A1P00488 732 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 PTPREP23469 700 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 SP3Q02447 781 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 BAATQ14032 418 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 PWP2Q15269 919 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 CCAR1Q8IX12 1150 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 ANKRD35Q8N283 1001 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 RASGRP4Q8TDF6 673 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 CRYGNQ8WXF5 182 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 MMP19Q99542 508 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 BEGAINQ9BUH8 593 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 ANO3Q9BYT9 981 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 CHMP5Q9NZZ3 219 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 COL20A1Q9P218 1284 aa14.35□□□□□ -0.11
TRAPPC12-218ENST00000479897 CCDC194A0A1B0GVG4 234 aa14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 SPDYE3A6NKU9 549 aa14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 HOXA13P31271 388 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 SREBF1P36956 1147 aa14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 GNL2Q13823 731 aaKnown RBP14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 MORN1Q5T089 497 aa14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 SOCS4Q8WXH5 440 aa14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 EHMT1Q9H9B1 1298 aa14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 BIN2Q9UBW5 565 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-218ENST00000479897 HOXC6P09630 235 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 ADORA2AP29274 412 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 TRAPPC10P48553 1259 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 FCGRTP55899 365 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 NONOQ15233 471 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 WDR78Q5VTH9 848 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 JAKMIP3Q5VZ66 844 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 MCTP1Q6DN14 999 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 USP6NLQ92738 828 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 TMEM260Q9NX78 707 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 ADD3Q9UEY8 706 aaKnown RBP14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 DIS3Q9Y2L1 958 aaKnown RBP14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 KIAA1217Q5T5P2 1943 aa14.33□□□□□ -0.12
TRAPPC12-218ENST00000479897 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms