RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 RBM47A0AV96 593 aaKnown RBP17.55■□□□□ 0.4
PRKN-207ENST00000479615 ARVCFO00192 962 aa17.55■□□□□ 0.4
PRKN-207ENST00000479615 TLR3O15455 904 aaKnown RBP17.55■□□□□ 0.4
PRKN-207ENST00000479615 ADCY6O43306 1168 aa17.55■□□□□ 0.4
PRKN-207ENST00000479615 DHX16O60231 1041 aaKnown RBP17.55■□□□□ 0.4
PRKN-207ENST00000479615 RAG1P15918 1043 aa17.55■□□□□ 0.4
PRKN-207ENST00000479615 SMPD1P17405 629 aa17.55■□□□□ 0.4
PRKN-207ENST00000479615 CDK7P50613 346 aa17.55■□□□□ 0.4
PRKN-207ENST00000479615 PTH1RQ03431 593 aa17.55■□□□□ 0.4
PRKN-207ENST00000479615 PDE4DQ08499 809 aa17.55■□□□□ 0.4
PRKN-207ENST00000479615 FSCN1Q16658 493 aaKnown RBP17.55■□□□□ 0.4
PRKN-207ENST00000479615 BRDTQ58F21 947 aaPredicted RBP17.55■□□□□ 0.4
PRKN-207ENST00000479615 FBXO11Q86XK2 927 aa17.55■□□□□ 0.4
PRKN-207ENST00000479615 FBXO16Q8IX29 292 aaPredicted RBP17.55■□□□□ 0.4
PRKN-207ENST00000479615 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.54■□□□□ 0.4
PRKN-207ENST00000479615 TRIM43BA6NCK2 446 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 MYADML2A6NDP7 307 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 IFIT3O14879 490 aaKnown RBP17.54■□□□□ 0.4
PRKN-207ENST00000479615 CTAGE5O15320 804 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 DYNC1LI2O43237 492 aaPredicted RBP17.54■□□□□ 0.4
PRKN-207ENST00000479615 EDNRBP24530 442 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 FAAP100Q0VG06 881 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 USH1GQ495M9 461 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 SLC30A10Q6XR72 485 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 SCFD2Q8WU76 684 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 BADQ92934 168 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 TRIM43Q96BQ3 446 aaPredicted RBP17.54■□□□□ 0.4
PRKN-207ENST00000479615 IWS1Q96ST2 819 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 AMNQ9BXJ7 453 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 WDR11Q9BZH6 1224 aa17.54■□□□□ 0.4
PRKN-207ENST00000479615 PALM3A6NDB9 673 aaPredicted RBP17.53■□□□□ 0.4
PRKN-207ENST00000479615 KLRF2D3W0D1 207 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 E7EWF7 191 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 SOX1O00570 391 aaPredicted RBP17.53■□□□□ 0.4
PRKN-207ENST00000479615 CPT1AP50416 773 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 WTAPQ15007 396 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 QRICH1Q2TAL8 776 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 CYB5R4Q7L1T6 521 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 EEPD1Q7L9B9 569 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 TMTC2Q8N394 836 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 NSUN6Q8TEA1 469 aaKnown RBP17.53■□□□□ 0.4
PRKN-207ENST00000479615 LRCH3Q96II8 777 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 MAP3K14Q99558 947 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 JMJD4Q9H9V9 463 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 POLR3EQ9NVU0 708 aa17.53■□□□□ 0.4
PRKN-207ENST00000479615 KPNA6O60684 536 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 TIMP1P01033 207 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 BMP2KLQ5H9B9 411 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 FAM109BQ6ICB4 259 aaPredicted RBP17.52■□□□□ 0.4
PRKN-207ENST00000479615 SH3RF1Q7Z6J0 888 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 CATIPQ7Z7H3 387 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 SLC43A3Q8NBI5 491 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 MTMR8Q96EF0 704 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 PURBQ96QR8 312 aaKnown RBP17.52■□□□□ 0.4
PRKN-207ENST00000479615 VAT1LQ9HCJ6 419 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 PDGFCQ9NRA1 345 aa17.52■□□□□ 0.4
PRKN-207ENST00000479615 ZBTB5O15062 677 aa17.51■□□□□ 0.39
PRKN-207ENST00000479615 BEX3Q00994 111 aa17.51■□□□□ 0.39
PRKN-207ENST00000479615 FPGSQ05932 587 aa17.51■□□□□ 0.39
PRKN-207ENST00000479615 TTLL4Q14679 1199 aa17.51■□□□□ 0.39
PRKN-207ENST00000479615 PPP2R5BQ15173 497 aa17.51■□□□□ 0.39
PRKN-207ENST00000479615 CPVLQ9H3G5 476 aa17.51■□□□□ 0.39
PRKN-207ENST00000479615 GPHNQ9NQX3 736 aaPredicted RBP17.51■□□□□ 0.39
PRKN-207ENST00000479615 MAD2L2Q9UI95 211 aa17.51■□□□□ 0.39
PRKN-207ENST00000479615 TBX21Q9UL17 535 aa17.51■□□□□ 0.39
PRKN-207ENST00000479615 RBM8AQ9Y5S9 174 aaKnown RBP17.51■□□□□ 0.39
PRKN-207ENST00000479615 GHRHRQ02643 423 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 ITGA7Q13683 1181 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 GRM4Q14833 912 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 STXBP2Q15833 593 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 TMEM67Q5HYA8 995 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 CASC1Q6TDU7 716 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 CXCL17Q6UXB2 119 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 FAM126BQ8IXS8 530 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 SYTL5Q8TDW5 730 aaPredicted RBP17.5■□□□□ 0.39
PRKN-207ENST00000479615 RIOX1Q9H6W3 641 aa17.5■□□□□ 0.39
PRKN-207ENST00000479615 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 KIF5BP33176 963 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 MCM5P33992 734 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 TROAPQ12815 778 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 MFSD5Q6N075 450 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 STAG2Q8N3U4 1231 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 TMEM199Q8N511 208 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 IGDCC4Q8TDY8 1250 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 TMEM87BQ96K49 555 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 RMDN3Q96TC7 470 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 LZTS2Q9BRK4 669 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 ESYT1Q9BSJ8 1104 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 PCDHA1Q9Y5I3 950 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 DNAH12Q6ZR08 3092 aa17.49■□□□□ 0.39
PRKN-207ENST00000479615 MCM3APO60318 1980 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 A6NJR5 290 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 EIF3JO75822 258 aaKnown RBP17.48■□□□□ 0.39
PRKN-207ENST00000479615 CD4P01730 458 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 SUPT20HL2P0C7V6 817 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 TXNP10599 105 aaKnown RBP17.48■□□□□ 0.39
PRKN-207ENST00000479615 HSD17B4P51659 736 aa17.48■□□□□ 0.39
PRKN-207ENST00000479615 IRX5P78411 483 aaPredicted RBP17.48■□□□□ 0.39
PRKN-207ENST00000479615 PPIGQ13427 754 aaKnown RBP eCLIP17.48■□□□□ 0.39
PRKN-207ENST00000479615 SHHQ15465 462 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms