RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 EGFRP00533 1210 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 POLR3DP05423 398 aaPredicted RBP7.83□□□□□ -1.16
USP48-208ENST00000479177 MCM2P49736 904 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 AK2P54819 239 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 TRDNQ13061 729 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 TOB2Q14106 344 aaPredicted RBP7.83□□□□□ -1.16
USP48-208ENST00000479177 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 SLC4A8Q2Y0W8 1093 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 FKBP1CQ5VVH2 108 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 MFSD6Q6ZSS7 791 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 CYB5R4Q7L1T6 521 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 DHX32Q7L7V1 743 aaKnown RBP7.83□□□□□ -1.16
USP48-208ENST00000479177 AMOTL1Q8IY63 956 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 KRT23Q9C075 422 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 ALDH8A1Q9H2A2 487 aaPredicted RBP7.83□□□□□ -1.16
USP48-208ENST00000479177 INCENPQ9NQS7 918 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 TMOD2Q9NZR1 351 aa7.83□□□□□ -1.16
USP48-208ENST00000479177 CNOT7Q9UIV1 285 aaKnown RBP7.83□□□□□ -1.16
USP48-208ENST00000479177 SERTM1A2A2V5 107 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 WNT10BO00744 389 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 DDNO94850 711 aaPredicted RBP7.82□□□□□ -1.16
USP48-208ENST00000479177 SLC3A2P08195 630 aaKnown RBP7.82□□□□□ -1.16
USP48-208ENST00000479177 ITGB7P26010 798 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 MCM5P33992 734 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 NT5C2P49902 561 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 PLCD1P51178 756 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 PSMA6P60900 246 aaKnown RBP7.82□□□□□ -1.16
USP48-208ENST00000479177 GABPAQ06546 454 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 NBPF9Q3BBW0 867 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 TBC1D10BQ4KMP7 808 aaPredicted RBP7.82□□□□□ -1.16
USP48-208ENST00000479177 ARSJQ5FYB0 599 aaPredicted RBP7.82□□□□□ -1.16
USP48-208ENST00000479177 Q6ZUG5 572 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 C16orf86Q6ZW13 317 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 ZFPM1Q8IX07 1006 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 PGBD3Q8N328 593 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 FBXL16Q8N461 479 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 SLC44A5Q8NCS7 719 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 FAM200AQ8TCP9 573 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 TRPM4Q8TD43 1214 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 ESR2Q92731 530 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 PBXIP1Q96AQ6 731 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 DYNLL2Q96FJ2 89 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 WDR90Q96KV7 1748 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 ZIC5Q96T25 663 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 LRRC2Q9BYS8 371 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 AGXT2Q9BYV1 514 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 EHD4Q9H223 541 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 CRISPLD1Q9H336 500 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 HCN2Q9UL51 889 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 SCN4AP35499 1836 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 PLIN4Q96Q06 1357 aa7.82□□□□□ -1.16
USP48-208ENST00000479177 A0A1W2PNR3 127 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 DDTLA6NHG4 134 aaPredicted RBP7.81□□□□□ -1.16
USP48-208ENST00000479177 TCP10L2B9ZVM9 353 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 H7C1D1 291 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 SH2B2O14492 632 aaPredicted RBP7.81□□□□□ -1.16
USP48-208ENST00000479177 MYO1BO43795 1136 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 PRDM1O75626 825 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 LARGE1O95461 756 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 HLA-DOAP06340 250 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 EPS15P42566 896 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 CDK8P49336 464 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 PDE4BQ07343 736 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 TCP10Q12799 353 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 ANKRD1Q15327 319 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 RRP12Q5JTH9 1297 aaKnown RBP7.81□□□□□ -1.16
USP48-208ENST00000479177 NOL8Q76FK4 1167 aaKnown RBP7.81□□□□□ -1.16
USP48-208ENST00000479177 CHST3Q7LGC8 479 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 TTC6Q86TZ1 520 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 FAM83AQ86UY5 434 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 STK11IPQ8N1F8 1099 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 BRF1Q92994 677 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 ABHD17AQ96GS6 310 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 TMX3Q96JJ7 454 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 TRERF1Q96PN7 1200 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 ARID3AQ99856 593 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 OXCT2Q9BYC2 517 aaPredicted RBP7.81□□□□□ -1.16
USP48-208ENST00000479177 DHX36Q9H2U1 1008 aaKnown RBP7.81□□□□□ -1.16
USP48-208ENST00000479177 DNAJC18Q9H819 358 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 VEZTQ9HBM0 779 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 TOMM22Q9NS69 142 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 ZDHHC3Q9NYG2 299 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 SERPINB13Q9UIV8 391 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 LIMCH1Q9UPQ0 1083 aa7.81□□□□□ -1.16
USP48-208ENST00000479177 ASTN2O75129 1339 aaPredicted RBP7.8□□□□□ -1.16
USP48-208ENST00000479177 BNIP3LO60238 219 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 RANBP6O60518 1105 aaKnown RBP7.8□□□□□ -1.16
USP48-208ENST00000479177 ATG7O95352 703 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 HOXB4P17483 251 aaPredicted RBP7.8□□□□□ -1.16
USP48-208ENST00000479177 SHMT1P34896 483 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 EVCP57679 992 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 ST3GAL1Q11201 340 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 CUL4AQ13619 759 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 TMEM164Q5U3C3 297 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 METTL16Q86W50 562 aaKnown RBP7.8□□□□□ -1.16
USP48-208ENST00000479177 IGDCC4Q8TDY8 1250 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 FAM151AQ8WW52 585 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 TMEM87BQ96K49 555 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 PRIMPOLQ96LW4 560 aa7.8□□□□□ -1.16
USP48-208ENST00000479177 MTA3Q9BTC8 594 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms