RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CUL5Q93034 780 aa15.03■□□□□ -0
CHD3-210ENST00000479080 FTOQ9C0B1 505 aaKnown RBP eCLIP15.03■□□□□ -0
CHD3-210ENST00000479080 EFCC1Q9HA90 598 aa15.03■□□□□ -0
CHD3-210ENST00000479080 A1CFQ9NQ94 594 aaKnown RBP15.03■□□□□ -0
CHD3-210ENST00000479080 CA12O43570 354 aa15.02■□□□□ -0
CHD3-210ENST00000479080 TLR2O60603 784 aa15.02■□□□□ -0
CHD3-210ENST00000479080 CTGFP29279 349 aa15.02■□□□□ -0
CHD3-210ENST00000479080 NBR1Q14596 966 aa15.02■□□□□ -0
CHD3-210ENST00000479080 FOXD4L6Q3SYB3 417 aaPredicted RBP15.02■□□□□ -0
CHD3-210ENST00000479080 MYSM1Q5VVJ2 828 aa15.02■□□□□ -0
CHD3-210ENST00000479080 FOXD4L3Q6VB84 417 aaPredicted RBP15.02■□□□□ -0
CHD3-210ENST00000479080 PIK3AP1Q6ZUJ8 805 aa15.02■□□□□ -0
CHD3-210ENST00000479080 REXO1Q8N1G1 1221 aaKnown RBP15.02■□□□□ -0
CHD3-210ENST00000479080 SHCBP1Q8NEM2 672 aa15.02■□□□□ -0
CHD3-210ENST00000479080 SYTL5Q8TDW5 730 aaPredicted RBP15.02■□□□□ -0
CHD3-210ENST00000479080 CRYGNQ8WXF5 182 aa15.02■□□□□ -0
CHD3-210ENST00000479080 FGD4Q96M96 766 aa15.02■□□□□ -0
CHD3-210ENST00000479080 ACAD9Q9H845 621 aa15.02■□□□□ -0
CHD3-210ENST00000479080 CTDP1Q9Y5B0 961 aaPredicted RBP15.02■□□□□ -0
CHD3-210ENST00000479080 ZSWIM8A7E2V4 1837 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 FRMPD4Q14CM0 1322 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 RPTORQ8N122 1335 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 CFBP00751 764 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 GNA11P29992 359 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 MAP2K2P36507 400 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 RPS6P62753 249 aaKnown RBP15.01□□□□□ -0.01
CHD3-210ENST00000479080 BAATQ14032 418 aaPredicted RBP15.01□□□□□ -0.01
CHD3-210ENST00000479080 NCAPG2Q86XI2 1143 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 CHST13Q8NET6 341 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 GPRC5AQ8NFJ5 357 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 ANO3Q9BYT9 981 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 CYP39A1Q9NYL5 469 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 PNMA2Q9UL42 364 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 MYH15Q9Y2K3 1946 aa15.01□□□□□ -0.01
CHD3-210ENST00000479080 GCOM1H8Y6P7 765 aaPredicted RBP15□□□□□ -0.01
CHD3-210ENST00000479080 SLC25A27O95847 323 aa15□□□□□ -0.01
CHD3-210ENST00000479080 POLR2MP0CAP2 368 aa15□□□□□ -0.01
CHD3-210ENST00000479080 PDIA4P13667 645 aaKnown RBP15□□□□□ -0.01
CHD3-210ENST00000479080 MRPL12P52815 198 aaKnown RBP15□□□□□ -0.01
CHD3-210ENST00000479080 DNM1Q05193 864 aaKnown RBP15□□□□□ -0.01
CHD3-210ENST00000479080 TRAF1Q13077 416 aa15□□□□□ -0.01
CHD3-210ENST00000479080 SAFBQ15424 915 aaKnown RBP eCLIP15□□□□□ -0.01
CHD3-210ENST00000479080 INF2Q27J81 1249 aa15□□□□□ -0.01
CHD3-210ENST00000479080 NSMFQ6X4W1 530 aa15□□□□□ -0.01
CHD3-210ENST00000479080 BRAPQ7Z569 592 aa15□□□□□ -0.01
CHD3-210ENST00000479080 IL31RAQ8NI17 732 aa15□□□□□ -0.01
CHD3-210ENST00000479080 TAAR1Q96RJ0 339 aa15□□□□□ -0.01
CHD3-210ENST00000479080 USP28Q96RU2 1077 aa15□□□□□ -0.01
CHD3-210ENST00000479080 CFHR5Q9BXR6 569 aa15□□□□□ -0.01
CHD3-210ENST00000479080 ZSCAN16Q9H4T2 348 aaPredicted RBP15□□□□□ -0.01
CHD3-210ENST00000479080 ZFYVE28Q9HCC9 887 aa15□□□□□ -0.01
CHD3-210ENST00000479080 RNF186Q9NXI6 227 aa15□□□□□ -0.01
CHD3-210ENST00000479080 DDX49Q9Y6V7 483 aaKnown RBP15□□□□□ -0.01
CHD3-210ENST00000479080 AP3B2Q13367 1082 aa14.99□□□□□ -0.01
CHD3-210ENST00000479080 RNF207Q6ZRF8 634 aa14.99□□□□□ -0.01
CHD3-210ENST00000479080 KRT25Q7Z3Z0 450 aa14.99□□□□□ -0.01
CHD3-210ENST00000479080 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
CHD3-210ENST00000479080 TBCKQ8TEA7 893 aa14.99□□□□□ -0.01
CHD3-210ENST00000479080 BRMS1Q9HCU9 246 aa14.99□□□□□ -0.01
CHD3-210ENST00000479080 LRRC37A2A6NM11 1700 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 DNAJC25-GNG10A0A024R161 153 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 SOWAHBA6NEL2 793 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 TBC1D8O95759 1140 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 UBXN2AP68543 259 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 CNTN2Q02246 1040 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 NONOQ15233 471 aaKnown RBP eCLIP14.98□□□□□ -0.01
CHD3-210ENST00000479080 CLEC17AQ6ZS10 378 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 FCHSD1Q86WN1 690 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 MCF2L2Q86YR7 1114 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
CHD3-210ENST00000479080 DNAJC5GQ8N7S2 189 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 GLT8D2Q9H1C3 349 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 FBXO40Q9UH90 709 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 CNPY2Q9Y2B0 182 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 PCDHB6Q9Y5E3 794 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 CLIC4Q9Y696 253 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 ZNF236Q9UL36 1845 aa14.98□□□□□ -0.01
CHD3-210ENST00000479080 PLXNB2O15031 1838 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 CCDC194A0A1B0GVG4 234 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 BAG4O95429 457 aaKnown RBP14.97□□□□□ -0.01
CHD3-210ENST00000479080 ALDH1A1P00352 501 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 COPB2P35606 906 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 SREBF1P36956 1147 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 PTPAQ15257 358 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 GPR142Q7Z601 462 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 TEX2Q8IWB9 1127 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 SAMD3Q8N6K7 520 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 FAM133AQ8N9E0 248 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 ARHGAP39Q9C0H5 1083 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 MROH8Q9H579 483 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.97□□□□□ -0.01
CHD3-210ENST00000479080 TFIP11Q9UBB9 837 aaKnown RBP14.97□□□□□ -0.01
CHD3-210ENST00000479080 MRVI1Q9Y6F6 885 aa14.97□□□□□ -0.01
CHD3-210ENST00000479080 COBLO75128 1261 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 TRPA1O75762 1119 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
CHD3-210ENST00000479080 TDP2O95551 362 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 PGK2P07205 417 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 PTPREP23469 700 aa14.96□□□□□ -0.01
CHD3-210ENST00000479080 ARHGAP4P98171 946 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms