RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 TRDNQ13061 729 aa23.84■■□□□ 1.41
TRIM8-203ENST00000479004 CDC37Q16543 378 aaPredicted RBP23.84■■□□□ 1.41
TRIM8-203ENST00000479004 USH1GQ495M9 461 aa23.84■■□□□ 1.41
TRIM8-203ENST00000479004 TLK2Q86UE8 772 aa23.84■■□□□ 1.41
TRIM8-203ENST00000479004 RGS22Q8NE09 1264 aa23.84■■□□□ 1.41
TRIM8-203ENST00000479004 MYH6P13533 1939 aa23.83■■□□□ 1.41
TRIM8-203ENST00000479004 KIAA0355O15063 1070 aa23.83■■□□□ 1.41
TRIM8-203ENST00000479004 CDK7P50613 346 aa23.83■■□□□ 1.41
TRIM8-203ENST00000479004 BEX3Q00994 111 aa23.83■■□□□ 1.41
TRIM8-203ENST00000479004 FAAP100Q0VG06 881 aa23.83■■□□□ 1.41
TRIM8-203ENST00000479004 TMEM63BQ5T3F8 832 aa23.83■■□□□ 1.41
TRIM8-203ENST00000479004 Q9Y3F1 56 aa23.83■■□□□ 1.41
TRIM8-203ENST00000479004 DYNC1LI2O43237 492 aaPredicted RBP23.82■■□□□ 1.4
TRIM8-203ENST00000479004 PTGS1P23219 599 aa23.82■■□□□ 1.4
TRIM8-203ENST00000479004 ITGB8P26012 769 aa23.82■■□□□ 1.4
TRIM8-203ENST00000479004 KIAA1211Q6ZU35 1233 aa23.82■■□□□ 1.4
TRIM8-203ENST00000479004 SKAP1Q86WV1 359 aa23.82■■□□□ 1.4
TRIM8-203ENST00000479004 MAP4K1Q92918 833 aa23.82■■□□□ 1.4
TRIM8-203ENST00000479004 MAF1Q9H063 256 aa23.82■■□□□ 1.4
TRIM8-203ENST00000479004 AP5M1Q9H0R1 490 aa23.82■■□□□ 1.4
TRIM8-203ENST00000479004 RBM47A0AV96 593 aaKnown RBP23.81■■□□□ 1.4
TRIM8-203ENST00000479004 DCDC2CA8MYV0 355 aa23.81■■□□□ 1.4
TRIM8-203ENST00000479004 DNERQ8NFT8 737 aa23.81■■□□□ 1.4
TRIM8-203ENST00000479004 VTI1AQ96AJ9 217 aa23.81■■□□□ 1.4
TRIM8-203ENST00000479004 JMJD4Q9H9V9 463 aa23.81■■□□□ 1.4
TRIM8-203ENST00000479004 TMEM39AQ9NV64 488 aa23.81■■□□□ 1.4
TRIM8-203ENST00000479004 TAF6LQ9Y6J9 622 aa23.81■■□□□ 1.4
TRIM8-203ENST00000479004 ABCB11O95342 1321 aa23.81■■□□□ 1.4
TRIM8-203ENST00000479004 MROH7Q68CQ1 1323 aa23.81■■□□□ 1.4
TRIM8-203ENST00000479004 A0A0U1RQG5 324 aaPredicted RBP23.8■■□□□ 1.4
TRIM8-203ENST00000479004 E7EWF7 191 aa23.8■■□□□ 1.4
TRIM8-203ENST00000479004 ARVCFO00192 962 aa23.8■■□□□ 1.4
TRIM8-203ENST00000479004 EDNRBP24530 442 aa23.8■■□□□ 1.4
TRIM8-203ENST00000479004 FSCN1Q16658 493 aaKnown RBP23.8■■□□□ 1.4
TRIM8-203ENST00000479004 QRICH1Q2TAL8 776 aa23.8■■□□□ 1.4
TRIM8-203ENST00000479004 DUSP28Q4G0W2 176 aa23.8■■□□□ 1.4
TRIM8-203ENST00000479004 STAG2Q8N3U4 1231 aa23.8■■□□□ 1.4
TRIM8-203ENST00000479004 MPHOSPH6Q99547 160 aaKnown RBP23.8■■□□□ 1.4
TRIM8-203ENST00000479004 VAT1LQ9HCJ6 419 aa23.8■■□□□ 1.4
TRIM8-203ENST00000479004 RAG1P15918 1043 aa23.79■■□□□ 1.4
TRIM8-203ENST00000479004 SHHQ15465 462 aa23.79■■□□□ 1.4
TRIM8-203ENST00000479004 STOX1Q6ZVD7 989 aa23.79■■□□□ 1.4
TRIM8-203ENST00000479004 NCOA7Q8NI08 942 aa23.79■■□□□ 1.4
TRIM8-203ENST00000479004 TBC1D5Q92609 795 aa23.79■■□□□ 1.4
TRIM8-203ENST00000479004 WDR11Q9BZH6 1224 aa23.79■■□□□ 1.4
TRIM8-203ENST00000479004 MAD2L2Q9UI95 211 aa23.79■■□□□ 1.4
TRIM8-203ENST00000479004 PALM3A6NDB9 673 aaPredicted RBP23.78■■□□□ 1.4
TRIM8-203ENST00000479004 DHX16O60231 1041 aaKnown RBP23.78■■□□□ 1.4
TRIM8-203ENST00000479004 ZEB2O60315 1214 aa23.78■■□□□ 1.4
TRIM8-203ENST00000479004 CABYRO75952 493 aa23.78■■□□□ 1.4
TRIM8-203ENST00000479004 PDE4DQ08499 809 aa23.78■■□□□ 1.4
TRIM8-203ENST00000479004 C9orf50Q5SZB4 431 aa23.78■■□□□ 1.4
TRIM8-203ENST00000479004 CXCL17Q6UXB2 119 aa23.78■■□□□ 1.4
TRIM8-203ENST00000479004 RALYLQ86SE5 291 aaKnown RBP23.78■■□□□ 1.4
TRIM8-203ENST00000479004 FBXO11Q86XK2 927 aa23.78■■□□□ 1.4
TRIM8-203ENST00000479004 TBX21Q9UL17 535 aa23.78■■□□□ 1.4
TRIM8-203ENST00000479004 KLRF2D3W0D1 207 aa23.77■■□□□ 1.4
TRIM8-203ENST00000479004 IFIT3O14879 490 aaKnown RBP23.77■■□□□ 1.4
TRIM8-203ENST00000479004 FAM126BQ8IXS8 530 aa23.77■■□□□ 1.4
TRIM8-203ENST00000479004 SLC43A3Q8NBI5 491 aa23.77■■□□□ 1.4
TRIM8-203ENST00000479004 MTMR8Q96EF0 704 aa23.77■■□□□ 1.4
TRIM8-203ENST00000479004 MRPL11Q9Y3B7 192 aaKnown RBP23.77■■□□□ 1.4
TRIM8-203ENST00000479004 RBM8AQ9Y5S9 174 aaKnown RBP23.77■■□□□ 1.4
TRIM8-203ENST00000479004 ERICH2A1L162 156 aa23.76■■□□□ 1.39
TRIM8-203ENST00000479004 B4DLN1 442 aa23.76■■□□□ 1.39
TRIM8-203ENST00000479004 MRPL12P52815 198 aaKnown RBP23.76■■□□□ 1.39
TRIM8-203ENST00000479004 BMP2KLQ5H9B9 411 aa23.76■■□□□ 1.39
TRIM8-203ENST00000479004 MCF2L2Q86YR7 1114 aa23.76■■□□□ 1.39
TRIM8-203ENST00000479004 SYTL5Q8TDW5 730 aaPredicted RBP23.76■■□□□ 1.39
TRIM8-203ENST00000479004 SENP2Q9HC62 589 aa23.76■■□□□ 1.39
TRIM8-203ENST00000479004 COL6A3P12111 3177 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 TIMP1P01033 207 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 GRM4Q14833 912 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 WTAPQ15007 396 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 CHST3Q7LGC8 479 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 DEFB123Q8N688 67 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 TAAR1Q96RJ0 339 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 AMNQ9BXJ7 453 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 COL20A1Q9P218 1284 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 GRIN2DO15399 1336 aa23.75■■□□□ 1.39
TRIM8-203ENST00000479004 CD4P01730 458 aa23.74■■□□□ 1.39
TRIM8-203ENST00000479004 EPHB4P54760 987 aa23.74■■□□□ 1.39
TRIM8-203ENST00000479004 ITGA7Q13683 1181 aa23.74■■□□□ 1.39
TRIM8-203ENST00000479004 SART3Q15020 963 aaKnown RBP23.74■■□□□ 1.39
TRIM8-203ENST00000479004 Q7L0L9 218 aa23.74■■□□□ 1.39
TRIM8-203ENST00000479004 MB21D2Q8IYB1 491 aaPredicted RBP23.74■■□□□ 1.39
TRIM8-203ENST00000479004 LSG1Q9H089 658 aaKnown RBP23.74■■□□□ 1.39
TRIM8-203ENST00000479004 NKRFO15226 690 aaKnown RBP eCLIP23.73■■□□□ 1.39
TRIM8-203ENST00000479004 TLR3O15455 904 aaKnown RBP23.73■■□□□ 1.39
TRIM8-203ENST00000479004 ANTXR2P58335 489 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 FPGSQ05932 587 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 TROAPQ12815 778 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 SLC35G1Q2M3R5 365 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 OR6J1Q8NGC5 347 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 IGDCC4Q8TDY8 1250 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 SCFD2Q8WU76 684 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 ESYT1Q9BSJ8 1104 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 SEZ6LQ9BYH1 1024 aa23.73■■□□□ 1.39
TRIM8-203ENST00000479004 ZBTB5O15062 677 aa23.72■■□□□ 1.39
TRIM8-203ENST00000479004 PPP1R11O60927 126 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms