RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 HOMER2Q9NSB8 354 aa14.84□□□□□ -0.03
HDAC8-217ENST00000478743 FAM50BQ9Y247 325 aa14.84□□□□□ -0.03
HDAC8-217ENST00000478743 RALGAPA2Q2PPJ7 1873 aa14.84□□□□□ -0.03
HDAC8-217ENST00000478743 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 STXBP3O00186 592 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 LINC01565O15544 149 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 NBNO60934 754 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 MTX1Q13505 466 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 EPC2Q52LR7 807 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC8-217ENST00000478743 RETREG2Q8NC44 543 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 PURBQ96QR8 312 aaKnown RBP14.83□□□□□ -0.04
HDAC8-217ENST00000478743 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 MYH4Q9Y623 1939 aa14.83□□□□□ -0.04
HDAC8-217ENST00000478743 HYAL1Q12794 435 aa14.82□□□□□ -0.04
HDAC8-217ENST00000478743 CTC1Q2NKJ3 1217 aa14.82□□□□□ -0.04
HDAC8-217ENST00000478743 POP1Q99575 1024 aaKnown RBP14.82□□□□□ -0.04
HDAC8-217ENST00000478743 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.82□□□□□ -0.04
HDAC8-217ENST00000478743 NSUN3Q9H649 340 aaKnown RBP14.82□□□□□ -0.04
HDAC8-217ENST00000478743 DCP1AQ9NPI6 582 aaPredicted RBP14.82□□□□□ -0.04
HDAC8-217ENST00000478743 BAHCC1Q9P281 2608 aa14.82□□□□□ -0.04
HDAC8-217ENST00000478743 CFAP47Q6ZTR5 3102 aa14.81□□□□□ -0.04
HDAC8-217ENST00000478743 ATP2A1O14983 1001 aa14.81□□□□□ -0.04
HDAC8-217ENST00000478743 KDM4AO75164 1064 aa14.81□□□□□ -0.04
HDAC8-217ENST00000478743 CNKSR3Q6P9H4 555 aa14.81□□□□□ -0.04
HDAC8-217ENST00000478743 RMDN1Q96DB5 314 aa14.81□□□□□ -0.04
HDAC8-217ENST00000478743 CRBNQ96SW2 442 aa14.81□□□□□ -0.04
HDAC8-217ENST00000478743 A1CFQ9NQ94 594 aaKnown RBP14.81□□□□□ -0.04
HDAC8-217ENST00000478743 DBNLQ9UJU6 430 aaKnown RBP14.81□□□□□ -0.04
HDAC8-217ENST00000478743 MAGEB6P1A0A0J9YX57 407 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 E9PSI1 815 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 CSPG5O95196 566 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 NBL1P41271 181 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 SMAD4Q13485 552 aaKnown RBP14.8□□□□□ -0.04
HDAC8-217ENST00000478743 GPM6BQ13491 265 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 PKN1Q16512 942 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 PTPROQ16827 1216 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 CCDC158Q5M9N0 1113 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 FRMD5Q7Z6J6 570 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 ADSSL1Q8N142 457 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 LCORLQ8N3X6 602 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 SP7Q8TDD2 431 aaPredicted RBP14.8□□□□□ -0.04
HDAC8-217ENST00000478743 KIFC2Q96AC6 838 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 MTG1Q9BT17 334 aaPredicted RBP14.8□□□□□ -0.04
HDAC8-217ENST00000478743 SLC38A10Q9HBR0 1119 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 GOPCQ9HD26 462 aa14.8□□□□□ -0.04
HDAC8-217ENST00000478743 H3BNC9 293 aa14.79□□□□□ -0.04
HDAC8-217ENST00000478743 NDUFB10O96000 172 aa14.79□□□□□ -0.04
HDAC8-217ENST00000478743 CXCL10P02778 98 aa14.79□□□□□ -0.04
HDAC8-217ENST00000478743 CDK8P49336 464 aa14.79□□□□□ -0.04
HDAC8-217ENST00000478743 MKRN4PQ13434 485 aaPredicted RBP14.79□□□□□ -0.04
HDAC8-217ENST00000478743 BFSP2Q13515 415 aa14.79□□□□□ -0.04
HDAC8-217ENST00000478743 SWAP70Q9UH65 585 aa14.79□□□□□ -0.04
HDAC8-217ENST00000478743 Q9Y3F1 56 aa14.79□□□□□ -0.04
HDAC8-217ENST00000478743 LOC730098B7Z3J9 87 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 PRKAB2O43741 272 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 HTRA4P83105 476 aaPredicted RBP14.78□□□□□ -0.04
HDAC8-217ENST00000478743 SIGLEC14Q08ET2 396 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 MBTPS1Q14703 1052 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 SLFNL1Q499Z3 407 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 IQSEC1Q6DN90 963 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 TRAF7Q6Q0C0 670 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 KIAA1211Q6ZU35 1233 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 LRRC8DQ7L1W4 858 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 CERS3Q8IU89 383 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 CHST13Q8NET6 341 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 WNT8BQ93098 351 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 ZNF512BQ96KM6 892 aaPredicted RBP14.78□□□□□ -0.04
HDAC8-217ENST00000478743 POLR3EQ9NVU0 708 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 ZNF292O60281 2723 aa14.78□□□□□ -0.04
HDAC8-217ENST00000478743 GALR2O43603 387 aaPredicted RBP14.77□□□□□ -0.05
HDAC8-217ENST00000478743 LGR5O75473 907 aa14.77□□□□□ -0.05
HDAC8-217ENST00000478743 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.05
HDAC8-217ENST00000478743 DUSP28Q4G0W2 176 aa14.77□□□□□ -0.05
HDAC8-217ENST00000478743 GDF6Q6KF10 455 aaPredicted RBP14.77□□□□□ -0.05
HDAC8-217ENST00000478743 NFRKBQ6P4R8 1299 aa14.77□□□□□ -0.05
HDAC8-217ENST00000478743 AFAP1L1Q8TED9 768 aa14.77□□□□□ -0.05
HDAC8-217ENST00000478743 COPS5Q92905 334 aa14.77□□□□□ -0.05
HDAC8-217ENST00000478743 CRNKL1Q9BZJ0 848 aaKnown RBP14.77□□□□□ -0.05
HDAC8-217ENST00000478743 CCDC8Q9H0W5 538 aaPredicted RBP14.77□□□□□ -0.05
HDAC8-217ENST00000478743 CTNNA3Q9UI47 895 aa14.77□□□□□ -0.05
HDAC8-217ENST00000478743 WDR87Q6ZQQ6 2873 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 ABHD14A-ACY1A0A1B0GW23 586 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 ASB14A6NK59 587 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 ZBED4O75132 1171 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 ARP10275 920 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 SELPP16109 830 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 CHMP4BP1P59074 171 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 PTGISQ16647 500 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 LRRFIP1Q32MZ4 808 aaKnown RBP14.76□□□□□ -0.05
HDAC8-217ENST00000478743 PRPF38AQ8NAV1 312 aaKnown RBP14.76□□□□□ -0.05
HDAC8-217ENST00000478743 OR6J1Q8NGC5 347 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 ACAD9Q9H845 621 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 GPR108Q9NPR9 543 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 SMC4Q9NTJ3 1288 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 RNF146Q9NTX7 359 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 FBXO40Q9UH90 709 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 CD207Q9UJ71 328 aa14.76□□□□□ -0.05
HDAC8-217ENST00000478743 INSL6Q9Y581 213 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms