RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 ASB14A6NK59 587 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 DUSP11O75319 330 aaKnown RBP13.62□□□□□ -0.23
SKI-202ENST00000478223 MCM5P33992 734 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 RTP1P59025 263 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 SART3Q15020 963 aaKnown RBP13.62□□□□□ -0.23
SKI-202ENST00000478223 CCSAPQ6IQ19 270 aaPredicted RBP13.62□□□□□ -0.23
SKI-202ENST00000478223 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 SLC39A5Q6ZMH5 540 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 FBXO11Q86XK2 927 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 HOMER1Q86YM7 354 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 NUP133Q8WUM0 1156 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 RIOX1Q9H6W3 641 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
SKI-202ENST00000478223 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 NR2E3Q9Y5X4 410 aa13.62□□□□□ -0.23
SKI-202ENST00000478223 LAMA2P24043 3122 aaKnown RBP13.62□□□□□ -0.23
SKI-202ENST00000478223 A0A1W2PQ45 241 aaPredicted RBP13.61□□□□□ -0.23
SKI-202ENST00000478223 A0A1W2PQY0 241 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 PLEKHA8P1O95397 391 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 CPA1P15085 419 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 SMPD1P17405 629 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 SNX17Q15036 470 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 HABP4Q5JVS0 413 aaKnown RBP13.61□□□□□ -0.23
SKI-202ENST00000478223 CATIPQ7Z7H3 387 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 RNF180Q86T96 592 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 CMTR1Q8N1G2 835 aaKnown RBP13.61□□□□□ -0.23
SKI-202ENST00000478223 SYTL5Q8TDW5 730 aaPredicted RBP13.61□□□□□ -0.23
SKI-202ENST00000478223 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 TAAR1Q96RJ0 339 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 UPF3AQ9H1J1 476 aaKnown RBP13.61□□□□□ -0.23
SKI-202ENST00000478223 GNEQ9Y223 722 aaKnown RBP13.61□□□□□ -0.23
SKI-202ENST00000478223 TANC1Q9C0D5 1861 aa13.61□□□□□ -0.23
SKI-202ENST00000478223 ZBTB5O15062 677 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 C6orf222P0C671 652 aaPredicted RBP13.6□□□□□ -0.23
SKI-202ENST00000478223 EDNRBP24530 442 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 GJA9P57773 515 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 BEX3Q00994 111 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 TNFAIP2Q03169 654 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 KCNA10Q16322 511 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 TRIM60Q495X7 471 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 TMEM87BQ96K49 555 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 MTA3Q9BTC8 594 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 AMNQ9BXJ7 453 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 ADD3Q9UEY8 706 aaKnown RBP13.6□□□□□ -0.23
SKI-202ENST00000478223 PNMA2Q9UL42 364 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 ATP11BQ9Y2G3 1177 aa13.6□□□□□ -0.23
SKI-202ENST00000478223 DDAH1O94760 285 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
SKI-202ENST00000478223 LIFRP42702 1097 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 ACLYP53396 1101 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 EXOSC10Q01780 885 aaKnown RBP13.59□□□□□ -0.23
SKI-202ENST00000478223 TSGA10IPQ3SY00 556 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 NFXL1Q6ZNB6 911 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 TLK2Q86UE8 772 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 SRBD1Q8N5C6 995 aaKnown RBP13.59□□□□□ -0.23
SKI-202ENST00000478223 RGS22Q8NE09 1264 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 KCNB2Q92953 911 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 NEK1Q96PY6 1258 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 VTA1Q9NP79 307 aa13.59□□□□□ -0.23
SKI-202ENST00000478223 MRPL11Q9Y3B7 192 aaKnown RBP13.59□□□□□ -0.23
SKI-202ENST00000478223 KAT6AQ92794 2004 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 CCDC69A6NI79 296 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 CFBP00751 764 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 CENPBP07199 599 aaPredicted RBP13.58□□□□□ -0.24
SKI-202ENST00000478223 ASGR1P07306 291 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 HSPA4P34932 840 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 MAGEA10P43363 369 aaPredicted RBP13.58□□□□□ -0.24
SKI-202ENST00000478223 HSD17B4P51659 736 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 RNF20Q5VTR2 975 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 SH3RF1Q7Z6J0 888 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 DNERQ8NFT8 737 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 COPS5Q92905 334 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 MAP3K14Q99558 947 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 GDF15Q99988 308 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 BRPF3Q9ULD4 1205 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 PCDHA1Q9Y5I3 950 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 SNX14Q9Y5W7 946 aa13.58□□□□□ -0.24
SKI-202ENST00000478223 PTPRSQ13332 1948 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 PNMA6FA0A0J9YX94 578 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 hCG_1642624A0A1W2PR95 340 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 RBM47A0AV96 593 aaKnown RBP13.57□□□□□ -0.24
SKI-202ENST00000478223 ARIH2O95376 493 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 HOXA13P31271 388 aaPredicted RBP13.57□□□□□ -0.24
SKI-202ENST00000478223 NKX3-2P78367 333 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
SKI-202ENST00000478223 GHRHRQ02643 423 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 PDE4DQ08499 809 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 IQSEC1Q6DN90 963 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 NOL8Q76FK4 1167 aaKnown RBP13.57□□□□□ -0.24
SKI-202ENST00000478223 MICU3Q86XE3 530 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 CTCFLQ8NI51 663 aaPredicted RBP13.57□□□□□ -0.24
SKI-202ENST00000478223 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
SKI-202ENST00000478223 SPZ1Q9BXG8 430 aa13.57□□□□□ -0.24
SKI-202ENST00000478223 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
SKI-202ENST00000478223 LOC102724159A0A0B4J2E5 919 aa13.56□□□□□ -0.24
SKI-202ENST00000478223 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
SKI-202ENST00000478223 DYNC1LI2O43237 492 aaPredicted RBP13.56□□□□□ -0.24
SKI-202ENST00000478223 EIF2AK2P19525 551 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms