RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 PRSS36Q5K4E3 855 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 RNF43Q68DV7 783 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 GK5Q6ZS86 529 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 HID1Q8IV36 788 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 FBXL6Q8N531 539 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 GATA6Q92908 595 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 ACSF2Q96CM8 615 aaPredicted RBP6.88□□□□□ -1.31
VPS45-207ENST00000477558 CAPN10Q9HC96 672 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 INPP5FQ9Y2H2 1132 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 C4AP0C0L4 1744 aa6.88□□□□□ -1.31
VPS45-207ENST00000477558 RBAK-RBAKDNI3L0D1 243 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 RNMTO43148 476 aaKnown RBP6.87□□□□□ -1.31
VPS45-207ENST00000477558 HTATSF1O43719 755 aaKnown RBP6.87□□□□□ -1.31
VPS45-207ENST00000477558 HTR3BO95264 441 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 PDE4BQ07343 736 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 NFIAQ12857 509 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 C1orf141Q5JVX7 400 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 IL17REQ8NFR9 667 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 TBC1D32Q96NH3 1257 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 SLC52A2Q9HAB3 445 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 ATG3Q9NT62 314 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 GINM1Q9NU53 330 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 REV1Q9UBZ9 1251 aa6.87□□□□□ -1.31
VPS45-207ENST00000477558 GNAT3A8MTJ3 354 aa6.86□□□□□ -1.31
VPS45-207ENST00000477558 DNAJA2O60884 412 aa6.86□□□□□ -1.31
VPS45-207ENST00000477558 LEFTY1O75610 366 aa6.86□□□□□ -1.31
VPS45-207ENST00000477558 IGLV1-40P01703 118 aa6.86□□□□□ -1.31
VPS45-207ENST00000477558 GJA8P48165 433 aa6.86□□□□□ -1.31
VPS45-207ENST00000477558 PNISRQ8TF01 805 aaKnown RBP6.86□□□□□ -1.31
VPS45-207ENST00000477558 DPH2Q9BQC3 489 aaPredicted RBP6.86□□□□□ -1.31
VPS45-207ENST00000477558 TMOD3Q9NYL9 352 aa6.86□□□□□ -1.31
VPS45-207ENST00000477558 EFR3BQ9Y2G0 817 aa6.86□□□□□ -1.31
VPS45-207ENST00000477558 GOLGB1Q14789 3259 aaKnown RBP6.86□□□□□ -1.31
VPS45-207ENST00000477558 FAM170BA6NMN3 283 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 CHURC1-FNTBB4DL54 471 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 ANP32CO43423 234 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 F13BP05160 661 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 ZNF165P49910 485 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 ZNF827Q17R98 1081 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 TMEM201Q5SNT2 666 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 ZAR1Q86SH2 424 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 MCATQ8IVS2 390 aaKnown RBP6.85□□□□□ -1.31
VPS45-207ENST00000477558 KCT2Q8NC54 265 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 RASGRP4Q8TDF6 673 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 XAGE3Q8WTP9 111 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 SMARCC1Q92922 1105 aaPredicted RBP6.85□□□□□ -1.31
VPS45-207ENST00000477558 TMEM87BQ96K49 555 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 ANTXR1Q9H6X2 564 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 EHMT1Q9H9B1 1298 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 ADAM30Q9UKF2 790 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 ASAP1Q9ULH1 1129 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 HEG1Q9ULI3 1381 aa6.85□□□□□ -1.31
VPS45-207ENST00000477558 WDR64B1ANS9 1081 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 ATE1O95260 518 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 SCN7AQ01118 1682 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 PRAMEF13Q5VWM6 474 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 ARMCX6Q7L4S7 300 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 REXO1Q8N1G1 1221 aaKnown RBP6.84□□□□□ -1.31
VPS45-207ENST00000477558 RIN3Q8TB24 985 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 SHKBP1Q8TBC3 707 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 SYTL4Q96C24 671 aaPredicted RBP6.84□□□□□ -1.31
VPS45-207ENST00000477558 DBNDD2Q9BQY9 259 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 TINF2Q9BSI4 451 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 FOXQ1Q9C009 403 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 PPT2Q9UMR5 302 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 BCORQ6W2J9 1755 aa6.84□□□□□ -1.31
VPS45-207ENST00000477558 CNTNAP4Q9C0A0 1308 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 SLC22A31A6NKX4 558 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 LRIG2O94898 1065 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 FAM87AP0C7U9 286 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 CAP2P40123 477 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 TMPOP42166 694 aaKnown RBP6.84□□□□□ -1.32
VPS45-207ENST00000477558 ITPK1Q13572 414 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 LRP8Q14114 963 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 SLC6A19Q695T7 634 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.32
VPS45-207ENST00000477558 TOP6BLQ8N6T0 577 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 RUNDC1Q96C34 613 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 DUSP23Q9BVJ7 150 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 KRTAP9-9Q9BYP9 154 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 KRTAP9-4Q9BYQ2 154 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 PNNQ9H307 717 aaKnown RBP6.84□□□□□ -1.32
VPS45-207ENST00000477558 KLHL3Q9UH77 587 aa6.84□□□□□ -1.32
VPS45-207ENST00000477558 CCNL1Q9UK58 526 aaPredicted RBP6.84□□□□□ -1.32
VPS45-207ENST00000477558 MAPK8IP3Q9UPT6 1336 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 BTBD11A6QL63 1104 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 CST3P01034 146 aaPredicted RBP6.83□□□□□ -1.32
VPS45-207ENST00000477558 NASPP49321 788 aaPredicted RBP6.83□□□□□ -1.32
VPS45-207ENST00000477558 WDR43Q15061 677 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS45-207ENST00000477558 SLC15A2Q16348 729 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 OGFOD3Q6PK18 319 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 CCDC81Q6ZN84 652 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 ZNF765Q7L2R6 523 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 AMIGO3Q86WK7 504 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 ZDHHC13Q8IUH4 622 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 FAM13CQ8NE31 585 aa6.83□□□□□ -1.32
VPS45-207ENST00000477558 PRDM10Q9NQV6 1147 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms