RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SRBD1Q8N5C6 995 aaKnown RBP20.53■□□□□ 0.88
PTPN7-209ENST00000477554 MORC4Q8TE76 937 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 KCNB2Q92953 911 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 NEK1Q96PY6 1258 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 TAAR1Q96RJ0 339 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 FAM184BQ9ULE4 1060 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 SNX14Q9Y5W7 946 aa20.53■□□□□ 0.88
PTPN7-209ENST00000477554 LAMA3Q16787 3333 aa20.52■□□□□ 0.88
PTPN7-209ENST00000477554 ZBTB5O15062 677 aa20.52■□□□□ 0.87
PTPN7-209ENST00000477554 SMPD1P17405 629 aa20.52■□□□□ 0.87
PTPN7-209ENST00000477554 BEX3Q00994 111 aa20.52■□□□□ 0.87
PTPN7-209ENST00000477554 TSGA10IPQ3SY00 556 aa20.52■□□□□ 0.87
PTPN7-209ENST00000477554 CCSAPQ6IQ19 270 aaPredicted RBP20.52■□□□□ 0.87
PTPN7-209ENST00000477554 CHRDL2Q6WN34 429 aa20.52■□□□□ 0.87
PTPN7-209ENST00000477554 NFXL1Q6ZNB6 911 aa20.52■□□□□ 0.87
PTPN7-209ENST00000477554 SYTL5Q8TDW5 730 aaPredicted RBP20.52■□□□□ 0.87
PTPN7-209ENST00000477554 SZT2Q5T011 3432 aa20.51■□□□□ 0.87
PTPN7-209ENST00000477554 ABCB11O95342 1321 aa20.51■□□□□ 0.87
PTPN7-209ENST00000477554 ASB14A6NK59 587 aa20.51■□□□□ 0.87
PTPN7-209ENST00000477554 CAPN2P17655 700 aa20.51■□□□□ 0.87
PTPN7-209ENST00000477554 HSPA4P34932 840 aa20.51■□□□□ 0.87
PTPN7-209ENST00000477554 ARRDC4Q8NCT1 418 aa20.51■□□□□ 0.87
PTPN7-209ENST00000477554 KLHDC9Q8NEP7 349 aa20.51■□□□□ 0.87
PTPN7-209ENST00000477554 TMEM87BQ96K49 555 aa20.51■□□□□ 0.87
PTPN7-209ENST00000477554 GNEQ9Y223 722 aaKnown RBP20.51■□□□□ 0.87
PTPN7-209ENST00000477554 KBTBD13C9JR72 458 aa20.5■□□□□ 0.87
PTPN7-209ENST00000477554 HOXA13P31271 388 aaPredicted RBP20.5■□□□□ 0.87
PTPN7-209ENST00000477554 SLC39A5Q6ZMH5 540 aa20.5■□□□□ 0.87
PTPN7-209ENST00000477554 CCDC82Q8N4S0 544 aa20.5■□□□□ 0.87
PTPN7-209ENST00000477554 AMNQ9BXJ7 453 aa20.5■□□□□ 0.87
PTPN7-209ENST00000477554 PCDHA1Q9Y5I3 950 aa20.5■□□□□ 0.87
PTPN7-209ENST00000477554 A0A1W2PQ45 241 aaPredicted RBP20.49■□□□□ 0.87
PTPN7-209ENST00000477554 A0A1W2PQY0 241 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 CCDC69A6NI79 296 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 DUSP11O75319 330 aaKnown RBP20.49■□□□□ 0.87
PTPN7-209ENST00000477554 DDAH1O94760 285 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 REC8O95072 547 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 CFBP00751 764 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 EDNRBP24530 442 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 LIFRP42702 1097 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 RTP1P59025 263 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 TNFAIP2Q03169 654 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 KCNA10Q16322 511 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 RNF20Q5VTR2 975 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 MICU3Q86XE3 530 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 ZFP91Q96JP5 570 aaPredicted RBP20.49■□□□□ 0.87
PTPN7-209ENST00000477554 PHF24Q9UPV7 400 aa20.49■□□□□ 0.87
PTPN7-209ENST00000477554 C6orf222P0C671 652 aaPredicted RBP20.48■□□□□ 0.87
PTPN7-209ENST00000477554 TRIM60Q495X7 471 aa20.48■□□□□ 0.87
PTPN7-209ENST00000477554 DHX32Q7L7V1 743 aaKnown RBP20.48■□□□□ 0.87
PTPN7-209ENST00000477554 COPS5Q92905 334 aa20.48■□□□□ 0.87
PTPN7-209ENST00000477554 JAKMIP1Q96N16 626 aaKnown RBP20.48■□□□□ 0.87
PTPN7-209ENST00000477554 UPF3AQ9H1J1 476 aaKnown RBP20.48■□□□□ 0.87
PTPN7-209ENST00000477554 PRO3102Q9H379 93 aa20.48■□□□□ 0.87
PTPN7-209ENST00000477554 RBM27Q9P2N5 1060 aaKnown RBP20.48■□□□□ 0.87
PTPN7-209ENST00000477554 ARIH2O95376 493 aa20.47■□□□□ 0.87
PTPN7-209ENST00000477554 GJA9P57773 515 aa20.47■□□□□ 0.87
PTPN7-209ENST00000477554 NOL8Q76FK4 1167 aaKnown RBP20.47■□□□□ 0.87
PTPN7-209ENST00000477554 SGMS1Q86VZ5 419 aa20.47■□□□□ 0.87
PTPN7-209ENST00000477554 RGS22Q8NE09 1264 aa20.47■□□□□ 0.87
PTPN7-209ENST00000477554 IL31RAQ8NI17 732 aa20.47■□□□□ 0.87
PTPN7-209ENST00000477554 MTA3Q9BTC8 594 aa20.47■□□□□ 0.87
PTPN7-209ENST00000477554 ATP11BQ9Y2G3 1177 aa20.47■□□□□ 0.87
PTPN7-209ENST00000477554 MRPL11Q9Y3B7 192 aaKnown RBP20.47■□□□□ 0.87
PTPN7-209ENST00000477554 LAMA2P24043 3122 aaKnown RBP20.47■□□□□ 0.87
PTPN7-209ENST00000477554 PNMA6FA0A0J9YX94 578 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 RBAK-RBAKDNI3L0D1 243 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 EIF2AK2P19525 551 aaKnown RBP20.46■□□□□ 0.87
PTPN7-209ENST00000477554 HSD17B4P51659 736 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 ACLYP53396 1101 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 APOA5Q6Q788 366 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 SH3RF1Q7Z6J0 888 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 RNF180Q86T96 592 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 TLK2Q86UE8 772 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 CTCFLQ8NI51 663 aaPredicted RBP20.46■□□□□ 0.87
PTPN7-209ENST00000477554 USP26Q9BXU7 913 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 FAM217BQ9NTX9 383 aaPredicted RBP20.46■□□□□ 0.87
PTPN7-209ENST00000477554 NR2E3Q9Y5X4 410 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 SLC12A7Q9Y666 1083 aa20.46■□□□□ 0.87
PTPN7-209ENST00000477554 DYNC1LI2O43237 492 aaPredicted RBP20.45■□□□□ 0.86
PTPN7-209ENST00000477554 SNX17Q15036 470 aa20.45■□□□□ 0.86
PTPN7-209ENST00000477554 HABP4Q5JVS0 413 aaKnown RBP20.45■□□□□ 0.86
PTPN7-209ENST00000477554 FANCBQ8NB91 859 aa20.45■□□□□ 0.86
PTPN7-209ENST00000477554 PPP1R13LQ8WUF5 828 aa20.45■□□□□ 0.86
PTPN7-209ENST00000477554 MAP3K14Q99558 947 aa20.45■□□□□ 0.86
PTPN7-209ENST00000477554 SPZ1Q9BXG8 430 aa20.45■□□□□ 0.86
PTPN7-209ENST00000477554 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
PTPN7-209ENST00000477554 VTA1Q9NP79 307 aa20.45■□□□□ 0.86
PTPN7-209ENST00000477554 ADD3Q9UEY8 706 aaKnown RBP20.45■□□□□ 0.86
PTPN7-209ENST00000477554 TRIOBPQ9H2D6 2365 aa20.45■□□□□ 0.86
PTPN7-209ENST00000477554 LTBP2Q14767 1821 aa20.45■□□□□ 0.86
PTPN7-209ENST00000477554 EPB41L2O43491 1005 aaKnown RBP20.44■□□□□ 0.86
PTPN7-209ENST00000477554 ASGR1P07306 291 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 CDC27P30260 824 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 PDE4DQ08499 809 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 APOBRQ0VD83 1088 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 TMTC3Q6ZXV5 915 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 RMDN3Q96TC7 470 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 WDR11Q9BZH6 1224 aa20.44■□□□□ 0.86
PTPN7-209ENST00000477554 PNMA2Q9UL42 364 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms