RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
SRRT-210ENST00000477529 CALM1P0DP23 149 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 CALM2P0DP24 149 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 CALM3P0DP25 149 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 COL6A1P12109 1028 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 CALML3P27482 149 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 KIF5BP33176 963 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 MORC4Q8TE76 937 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 BRPF3Q9ULD4 1205 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 SIP14410 1827 aa16.35■□□□□ 0.21
SRRT-210ENST00000477529 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 DNM1LO00429 736 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 GHRHRQ02643 423 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 ACVR2BQ13705 512 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
SRRT-210ENST00000477529 CCDC144BQ3MJ40 725 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 C11orf49Q9H6J7 331 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 COL20A1Q9P218 1284 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 ADD3Q9UEY8 706 aaKnown RBP16.34■□□□□ 0.21
SRRT-210ENST00000477529 CNTNAP5Q8WYK1 1306 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 SYNRGQ9UMZ2 1314 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 NID2Q14112 1375 aa16.34■□□□□ 0.21
SRRT-210ENST00000477529 PTPRSQ13332 1948 aa16.33■□□□□ 0.21
SRRT-210ENST00000477529 PNMA6FA0A0J9YX94 578 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 RARBP10826 455 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 CASTP20810 708 aaKnown RBP16.33■□□□□ 0.2
SRRT-210ENST00000477529 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 FBXO16Q8IX29 292 aaPredicted RBP16.33■□□□□ 0.2
SRRT-210ENST00000477529 CMTR1Q8N1G2 835 aaKnown RBP16.33■□□□□ 0.2
SRRT-210ENST00000477529 SRBD1Q8N5C6 995 aaKnown RBP16.33■□□□□ 0.2
SRRT-210ENST00000477529 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 HTATIP2Q9BUP3 242 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 AGXT2Q9BYV1 514 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 MAF1Q9H063 256 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 XPNPEP3Q9NQH7 507 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 MRPL11Q9Y3B7 192 aaKnown RBP16.33■□□□□ 0.2
SRRT-210ENST00000477529 PCDHA1Q9Y5I3 950 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 LAMA3Q16787 3333 aa16.33■□□□□ 0.2
SRRT-210ENST00000477529 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 ZBTB43O43298 467 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 ADAMTS4O75173 837 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 EDNRBP24530 442 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 GNAQP50148 359 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 HSD17B4P51659 736 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 LRRC41Q15345 812 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
SRRT-210ENST00000477529 Q6ZUG5 572 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 MCF2L2Q86YR7 1114 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 DNERQ8NFT8 737 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 SYTL5Q8TDW5 730 aaPredicted RBP16.32■□□□□ 0.2
SRRT-210ENST00000477529 PIBF1Q8WXW3 757 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 LZTS2Q9BRK4 669 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 FAM184BQ9ULE4 1060 aa16.32■□□□□ 0.2
SRRT-210ENST00000477529 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.31■□□□□ 0.2
SRRT-210ENST00000477529 DUSP11O75319 330 aaKnown RBP16.31■□□□□ 0.2
SRRT-210ENST00000477529 PGK1P00558 417 aa16.31■□□□□ 0.2
SRRT-210ENST00000477529 CFBP00751 764 aa16.31■□□□□ 0.2
SRRT-210ENST00000477529 PRPF38BQ5VTL8 546 aaKnown RBP16.31■□□□□ 0.2
SRRT-210ENST00000477529 EEPD1Q7L9B9 569 aa16.31■□□□□ 0.2
SRRT-210ENST00000477529 FBXL16Q8N461 479 aa16.31■□□□□ 0.2
SRRT-210ENST00000477529 ARRDC4Q8NCT1 418 aa16.31■□□□□ 0.2
SRRT-210ENST00000477529 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
SRRT-210ENST00000477529 VTA1Q9NP79 307 aa16.31■□□□□ 0.2
SRRT-210ENST00000477529 KBTBD13C9JR72 458 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 PSMA5P28066 241 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 ADCYAP1R1P41586 468 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 RCAN1P53805 252 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 FGD1P98174 961 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 APOBRQ0VD83 1088 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 RTN1Q16799 776 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 TAPT1Q6NXT6 567 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 BRF1Q92994 677 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 UPF3AQ9H1J1 476 aaKnown RBP16.3■□□□□ 0.2
SRRT-210ENST00000477529 ZSWIM6Q9HCJ5 1215 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 PDGFCQ9NRA1 345 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 RBM28Q9NW13 759 aaKnown RBP16.3■□□□□ 0.2
SRRT-210ENST00000477529 ARID2Q68CP9 1835 aa16.3■□□□□ 0.2
SRRT-210ENST00000477529 MICAL3Q7RTP6 2002 aa16.29■□□□□ 0.2
SRRT-210ENST00000477529 MYADML2A6NDP7 307 aa16.29■□□□□ 0.2
SRRT-210ENST00000477529 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
SRRT-210ENST00000477529 GOLGA8BA8MQT2 603 aa16.29■□□□□ 0.2
SRRT-210ENST00000477529 TRAF1Q13077 416 aa16.29■□□□□ 0.2
SRRT-210ENST00000477529 RUFY3Q7L099 469 aa16.29■□□□□ 0.2
SRRT-210ENST00000477529 DPF3Q92784 378 aa16.29■□□□□ 0.2
SRRT-210ENST00000477529 TAAR1Q96RJ0 339 aa16.29■□□□□ 0.2
SRRT-210ENST00000477529 FAM217BQ9NTX9 383 aaPredicted RBP16.29■□□□□ 0.2
SRRT-210ENST00000477529 SEC63Q9UGP8 760 aaKnown RBP16.29■□□□□ 0.2
SRRT-210ENST00000477529 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
SRRT-210ENST00000477529 hCG_1642624A0A1W2PR95 340 aa16.28■□□□□ 0.2
SRRT-210ENST00000477529 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
SRRT-210ENST00000477529 PTGS1P23219 599 aa16.28■□□□□ 0.2
SRRT-210ENST00000477529 CST5P28325 142 aaPredicted RBP16.28■□□□□ 0.2
SRRT-210ENST00000477529 CDC27P30260 824 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms