RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 IL27Q8NEV9 243 aa14.32□□□□□ -0.12
CLCNKA-205ENST00000477360 NUP133Q8WUM0 1156 aa14.32□□□□□ -0.12
CLCNKA-205ENST00000477360 TSEN34Q9BSV6 310 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-205ENST00000477360 CPVLQ9H3G5 476 aa14.32□□□□□ -0.12
CLCNKA-205ENST00000477360 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-205ENST00000477360 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
CLCNKA-205ENST00000477360 PDE4DIPQ5VU43 2346 aa14.32□□□□□ -0.12
CLCNKA-205ENST00000477360 PLXNA1Q9UIW2 1896 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 PTPDC1A2A3K4 754 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 CST5P28325 142 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 CNGA1P29973 690 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 ALDH5A1P51649 535 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 FGD1P98174 961 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 SLC35G1Q2M3R5 365 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 IQSEC1Q6DN90 963 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 RUFY3Q7L099 469 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 RNF180Q86T96 592 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 NSUN6Q8TEA1 469 aaKnown RBP14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 PIGSQ96S52 555 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 ALDH8A1Q9H2A2 487 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 VAT1LQ9HCJ6 419 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 GPHNQ9NQX3 736 aaPredicted RBP14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 CYP46A1Q9Y6A2 500 aa14.31□□□□□ -0.12
CLCNKA-205ENST00000477360 RBM47A0AV96 593 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 PIK3CDO00329 1044 aa14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 USH1GQ495M9 461 aa14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 C1orf53Q5VUE5 145 aa14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 SYTL5Q8TDW5 730 aaPredicted RBP14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 PAWRQ96IZ0 340 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 UPF3AQ9H1J1 476 aaKnown RBP14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 C11orf49Q9H6J7 331 aa14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 SPC25Q9HBM1 224 aa14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 XPNPEP3Q9NQH7 507 aa14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 ASTN1O14525 1302 aa14.3□□□□□ -0.12
CLCNKA-205ENST00000477360 OPLAHO14841 1288 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 NKRFO15226 690 aaKnown RBP eCLIP14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 PPP1R11O60927 126 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 CASTP20810 708 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 CALML3P27482 149 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 FUT2Q10981 343 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 RTN1Q16799 776 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 CCDC144BQ3MJ40 725 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 PRAMEF19Q5SWL8 479 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 PPP1R18Q6NYC8 613 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 SLC30A10Q6XR72 485 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 MICU3Q86XE3 530 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 SRBD1Q8N5C6 995 aaKnown RBP14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 SEZ6LQ9BYH1 1024 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 LRRC2Q9BYS8 371 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 GLT8D2Q9H1C3 349 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 ZHX1Q9UKY1 873 aaPredicted RBP14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 NR2E3Q9Y5X4 410 aa14.29□□□□□ -0.12
CLCNKA-205ENST00000477360 KLF18A0A0U1RQI7 1052 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 MOXD2PA6NHM9 499 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 KBTBD13C9JR72 458 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 GCOM1H8Y6P7 765 aaPredicted RBP14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 ADAMTS4O75173 837 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 STAM2O75886 525 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 POLR2MP0CAP2 368 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 TAL1P17542 331 aaPredicted RBP14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 GJA9P57773 515 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 LRRC41Q15345 812 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 PRPF38BQ5VTL8 546 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 XRRA1Q6P2D8 792 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 Q6ZUG5 572 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 HOMER1Q86YM7 354 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 FAM177A1Q8N128 213 aaPredicted RBP14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 PCSK9Q8NBP7 692 aaKnown RBP14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 KLHDC9Q8NEP7 349 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 ZNF274Q96GC6 653 aaPredicted RBP14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 RMDN3Q96TC7 470 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 MYL10Q9BUA6 226 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 BACH2Q9BYV9 841 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
CLCNKA-205ENST00000477360 FRMPD4Q14CM0 1322 aa14.27□□□□□ -0.12
CLCNKA-205ENST00000477360 EIF3JO75822 258 aaKnown RBP14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 PLEKHA8P1O95397 391 aa14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 TNFAIP2Q03169 654 aa14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 PDE4DQ08499 809 aa14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 SNX17Q15036 470 aa14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 ANKRD1Q15327 319 aa14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 TAPT1Q6NXT6 567 aa14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 SCFD2Q8WU76 684 aa14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 BRF1Q92994 677 aa14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
CLCNKA-205ENST00000477360 SYNRGQ9UMZ2 1314 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 GOLGA8AA7E2F4 631 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 GOLGA8BA8MQT2 603 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 SEC24BO95487 1268 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 CFBP00751 764 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 METAP2P50579 478 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 STXBP2Q15833 593 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 DUSP28Q4G0W2 176 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 MCTP2Q6DN12 878 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 KCNV1Q6PIU1 500 aa14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 FAM217BQ9NTX9 383 aaPredicted RBP14.26□□□□□ -0.13
CLCNKA-205ENST00000477360 ELP1O95163 1332 aa14.25□□□□□ -0.13
CLCNKA-205ENST00000477360 CNTNAP5Q8WYK1 1306 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms